| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0333 |
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| Symbol | rbcL |
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| ID | 3706504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 359642 |
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| End bp | 361120 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637736845 |
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| Product | ribulose bisophosphate carboxylase |
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| Protein accession | YP_342389 |
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| Protein GI | 77163864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000001817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAT CAGAAACAAT CGCCGAAGGG AAAGATCGTT ATCAAGCCGG CGTTATCCCT
TATAAAAAGA TGGGCTACTG GGAGCCTGAT TACCAACCTA AAGACACTGA CATCATCGCG
ATGTTCCGCA TCACCCCACA GCCGGGCGTC GATCCCGAGG AAGCCGCTGC TGCCGTGGCA
GGTGAGTCCT CCACCGCTAC TTGGACGGTC GTGTGGACGG ATCGCTTGAC CGACTGCGAG
CTTTACCGTG CTAAAGCCTA TCGCGCAGAT CTGGTACCCA ATACGGGCGA AGGGACTAAA
AACGAAGCGC AATATTTTGC CTATATTGCC TATGATTTGG ATCTTTTCGA GCCTGGCTCC
ATCGCCAATT TGACAGCCTC TATCATCGGC AACGTCTTCG GCTTCAAGGC GGTAAAAGCC
CTGCGCCTAG AAGACATGCG TATCCCAGTT GCCTACCTGA AAACCTTTCA GGGACCAGCT
ACCGGGGTCG TGGTGGAGCG GGAACGCCTA GATAAATTTG GCCGCCCCCT GCTCGGCGCC
ACCACCAAGC CTAAACTCGG CCTTTCCGGC CGCAATTACG GCCGGGTAGT CTATGAGGCC
CTGAAAGGCG GTCTCGACTT CGTCAAGGAC GATGAGAACA TCAACTCCCA GCCGTTCATG
CACTGGCGCG ATCGGTTCCT CTATTGCATG GAAGCGGTTA ACAAGGCATC CGCGGCTACC
GGCGAAGTCA AGGGCCATTA CCTCAACGTG ACCGCCGCTA CCATGGAAGA CATGTACGAG
CGGGCTGAGT TTGCTAAATC CCTCGGCTCA GTCATCATCA TGATTGACTT GGTGGTGGGT
TATACCGCGA TTCAGTCCAT GGCCAAGTGG GCCCGCAAGA ACGATATGAT CTTGCATCTC
CATCGCGCTG GTAATTCGAC CTATTCCCGG CAGAAGAATC ACGGCATGAA CTTCCGTGTA
ATTTGTAAGT GGATGCGCAT GGCCGGGGTC GATCATATCC ATGCTGGTAC CGTGGTCGGC
AAGCTGGAAG GCGATCCGCT CATGATCAAG GGTTTCTACG ATACCCTCCT TGATTCACAC
ACGCCGACAA GCCTCGAGCA TGGGTTATTC TTCGATCAGG ATTGGGCATC CTTGAATAAA
GTGATGCCGG TTGCCTCTGG TGGTATTCAC GCCGGTCAGA TGCACCAACT CATTCAATAC
CTGGGCGAGG ATGTAATACT ACAATTCGGT GGTGGCACCA TCGGCCATCC ACAGGGTATC
CAAGCGGGTG CAGTTGCTAA CCGCGTCGCT CTGGAAGCCA TGATCTTGGC GCGTAATGAA
GGCCGTGATT ATGTGAAGGA AGGTCCTCAA ATCCTCCAGG ATGCCGCCAA GTGGTGTTCG
CCCCTCAAGG CCGCCCTGGA CACCTGGAAG GATGTGACCT TCAATTATGA ATCGACCGAT
ACGGCCGACT TCGTGCCAAC GGCCACAGCC AGCGTTTAA
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| Protein sequence | MGKSETIAEG KDRYQAGVIP YKKMGYWEPD YQPKDTDIIA MFRITPQPGV DPEEAAAAVA
GESSTATWTV VWTDRLTDCE LYRAKAYRAD LVPNTGEGTK NEAQYFAYIA YDLDLFEPGS
IANLTASIIG NVFGFKAVKA LRLEDMRIPV AYLKTFQGPA TGVVVERERL DKFGRPLLGA
TTKPKLGLSG RNYGRVVYEA LKGGLDFVKD DENINSQPFM HWRDRFLYCM EAVNKASAAT
GEVKGHYLNV TAATMEDMYE RAEFAKSLGS VIIMIDLVVG YTAIQSMAKW ARKNDMILHL
HRAGNSTYSR QKNHGMNFRV ICKWMRMAGV DHIHAGTVVG KLEGDPLMIK GFYDTLLDSH
TPTSLEHGLF FDQDWASLNK VMPVASGGIH AGQMHQLIQY LGEDVILQFG GGTIGHPQGI
QAGAVANRVA LEAMILARNE GRDYVKEGPQ ILQDAAKWCS PLKAALDTWK DVTFNYESTD
TADFVPTATA SV
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