| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0329 |
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| Symbol | |
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| ID | 3706500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 356557 |
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| End bp | 357426 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637736841 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_342385 |
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| Protein GI | 77163860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0875281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGG AACCCCGCTC CGTGCGCTTG AAGATTCGCT CCCAAGGGAC GGTAAGGGCT
TGCACGGACA TGAAATTGAC TGCGCAAGTG GAGGGCAAAG TGGTCAAAAT GGCCCCTGGT
TTTAAGGAGG GGAAGTTTTT TAGGGAAGGG GATGTATTAA TTCAAATCGA GCCGCGGGAT
TACGATTTGG CGGTGATCAA GGCCCAGGCA CGGGTAGCGG CAGCCCAGGG CGAGTTGTTA
CGGGAGGAGG CTAAAGCGGA TTTAGCTCGG AAGGATTGGG AGAGTATTGG CAAAGGGGAA
CCCAGTCCCC TGATGTTACG GATACCGGAA CTTAAAGAGG CGCGGGCCCG GCTTCAGGCA
GCTAAAGCCG CGCTTGAGGA GGCCCGGTTG CGCCGGGAGC GGACCGAACT GCAGGCCCCC
TTCAATGGCC GTGTTCAGGA GCGGTGGGTC GAGGTAGGAG AATATGTGGA GGAGGGTACC
CACTTGGCTC GGCTATTTGC TGTGGATAGA GCGGAAGCAC GCCTGCCCCT GACTCCAGCT
GAACTAGCTT TTCTGGATCT ACCCTTGGCC CCTCGACAGA ACTTGGGGGA AAAAGGGCCT
AAGGTGATGT TACAGGCTTC CCTGGCGGGA AAACGCCATT CCTGGGAGGG GCGGATCGTT
CGCACCGAAG GAGTCATCGA CGAAAAAACC CGGATGTTGT ACGCCGTTGC CGAAGTGCGG
GACCCTTACG GAGATCTGGG TCTTTCCCCG GGAGCGCTTC TGTTGGTGGG TTTGTTTGTG
GAAGCGGAGA TTGAAGGCCG GACTTTGGAC CATGCCCATT TGCTTCCCCG CCAAGCTTTG
CGTCAGCCAA GTACTGGTGG TCAATGGTGA
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| Protein sequence | MAVEPRSVRL KIRSQGTVRA CTDMKLTAQV EGKVVKMAPG FKEGKFFREG DVLIQIEPRD
YDLAVIKAQA RVAAAQGELL REEAKADLAR KDWESIGKGE PSPLMLRIPE LKEARARLQA
AKAALEEARL RRERTELQAP FNGRVQERWV EVGEYVEEGT HLARLFAVDR AEARLPLTPA
ELAFLDLPLA PRQNLGEKGP KVMLQASLAG KRHSWEGRIV RTEGVIDEKT RMLYAVAEVR
DPYGDLGLSP GALLLVGLFV EAEIEGRTLD HAHLLPRQAL RQPSTGGQW
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