| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0328 |
|---|
| Symbol | |
|---|
| ID | 3706499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 355197 |
|---|
| End bp | 356396 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637736840 |
|---|
| Product | BNR repeat-containing protein |
|---|
| Protein accession | YP_342384 |
|---|
| Protein GI | 77163859 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TTTTACGAAG CCACCTGTGT GCAATGGTGT TGTTATGGTT GATAGGATAT
GGGGGGACGA TGGCGAGCGC CTCGGAAATG TTGGTGCCGG AAATCGAGAC TCCTACTCCG
GTAGGCAGCC GTCAGCATCA GCTCAATCAA ACGGCTCAAG GGCAATTATT ATTGAGTTGG
GTAGAAAAGG GGGAGCAGGG TAGCCATCTG CGGTTTGCCG TTCTTGAAGC TGAGGGCTGG
TCCGCTCCTC AAACCGTAGT GACGGTCCGC GGCAAGCTTG CTGCGGCCCC GGTGGTATTG
GGTCTGAAAG ACGGGGGGGC CTTAGCCGCC GCCTGGATGA GCAGTACTGA GCAGAAGGAT
AATCCTTTTG GCGCCGAACT TTATCTCTCC CGTTCCACGG ATGGGGGCGA GAGCTGGAGT
AAGCCGCTAC AGCCCTATTC TGGGGAAGCC CGCATCTATG ATGCGCAAAT GTCCCTGGCC
TCCCTTGATG ATGGCCGTCT GGCATTGGTG TGGACCGATC AGCGGCATAA GCCGGAACGC
TATCAGCTCA TGGCCACCCT GATTGATGGG CAGGGGAAGC CTGGCTCCGA GATGATCCTG
GATAAGGATG TCTGCTCTTG TTGCAATACC CGTACCATTG CCCAGGGGGA TACCTTGTGG
ACGGCCTACC GGGATCGTCT GGAAGGGGAA GTGCGGGATA TAGCCTTGGT CCGCTGGTCT
TCAGAAGGCC CCTCCCAGGC GAATATCGTG CATGATGACC AGTGGGTGAT TGAAGGTTGC
CCCAGCAACG GTCCTGCGGT GGCTAGGCGC GATGGGCTCA CCATGGTGAG CTGGTTTACG
GCGGCGGACG GTGTGGGCCG GGTGCGGACC GCTTTCTGGC CCGAGGGGGA GAATCATTTT
GCAAAACCCA TAGAAGTCGA TGCCCATGCC AATGGCTATG TCAATGCCCT GCTGTTGGAA
GACGGCTCCG CTCTGGTGGT TTGGCGGGGG CGGGTCGGTC CGACGGAGGA GTTACGTCTG
GCTCAGGTAA AGCAGGACGG TACAGTGCAG AATCAGATCG CGCTCTATCG CGGTGACTTT
CCCCGTTGGC CTAGCCGGCA TTTAAGCCTG GCGCAAGTGG GTGATTCGGT TTATGTGGCG
TGGCTAGACC TTGAGCAAGC GCGGATACGA TTGGTGAAAA GACCCATGCC CGCTGAGTAA
|
|---|
| Protein sequence | MKKFLRSHLC AMVLLWLIGY GGTMASASEM LVPEIETPTP VGSRQHQLNQ TAQGQLLLSW
VEKGEQGSHL RFAVLEAEGW SAPQTVVTVR GKLAAAPVVL GLKDGGALAA AWMSSTEQKD
NPFGAELYLS RSTDGGESWS KPLQPYSGEA RIYDAQMSLA SLDDGRLALV WTDQRHKPER
YQLMATLIDG QGKPGSEMIL DKDVCSCCNT RTIAQGDTLW TAYRDRLEGE VRDIALVRWS
SEGPSQANIV HDDQWVIEGC PSNGPAVARR DGLTMVSWFT AADGVGRVRT AFWPEGENHF
AKPIEVDAHA NGYVNALLLE DGSALVVWRG RVGPTEELRL AQVKQDGTVQ NQIALYRGDF
PRWPSRHLSL AQVGDSVYVA WLDLEQARIR LVKRPMPAE
|
|---|
| |