Gene Noc_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0317 
Symbol 
ID3706488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp343008 
End bp343742 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content50% 
IMG OID637736831 
Producthypothetical protein 
Protein accessionYP_342375 
Protein GI77163850 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA AAGCAGGAGA GAAGGAAACG CGGAAAACTC CATTGGAGGA AGTGCAGGAG 
CGGGAGCAGT CCATAGCAAA ATATCTACAG ACCCATCCAG ATTTTTTTGC TCGCCATCCG
GATCTTCTAA GCGAATTGAC CATTCCCCAT CCTAGCGGCG CTGCAATTAG CCTGGTGGAG
CGGCAATTAG CGCTATTGCG CGGACAGAAC AGGGAATTAA AGCGGCAGCT GCGCGATTTA
ATTGAAAATG CTATGGTCAA TGACGACTTA AGCAAAAAGG TGCATAAATT AGCATTGGGG
GTGTTGACAG CGGCTACTCC CCAGGCGGCG ATTGAAGTCT TATTTTCCTC TTTACAGACT
GGTTTTGACG TGGATGTTAT TGCCTTAAGG TTATTCTTCG ATGGTAAATC TTTGCCCCCT
CCCGCGCCGG ATCATCTTAA TGTGATGCGA GTTTCTCGAA ATGCCCCTGA ACTTGAAGTG
TTCGCCAGTG TTTTGAAAAG CCCCCAACCC ATTTGCGGTC GGCTCACTGT AGAGCAGAGA
GATTATTTAT TTGGAGAAGA GGCGGAACGG GCGGTCTCTT GCGCTTTGAT TCCCTTGGGT
GAAGAGCAGC GCCGGGGGAT GCTTGCCATG GGCAGCCAAG AACCGAACCG GTTCAGGGCT
GATCTAGGAA CGATATTTCT GGATTATTTG GGGGTCATTG TGGAGCGGGC TCTGCATCGC
CATTGGCCAT ACTGA
 
Protein sequence
MRKKAGEKET RKTPLEEVQE REQSIAKYLQ THPDFFARHP DLLSELTIPH PSGAAISLVE 
RQLALLRGQN RELKRQLRDL IENAMVNDDL SKKVHKLALG VLTAATPQAA IEVLFSSLQT
GFDVDVIALR LFFDGKSLPP PAPDHLNVMR VSRNAPELEV FASVLKSPQP ICGRLTVEQR
DYLFGEEAER AVSCALIPLG EEQRRGMLAM GSQEPNRFRA DLGTIFLDYL GVIVERALHR
HWPY