| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0312 |
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| Symbol | |
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| ID | 3706483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 338120 |
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| End bp | 339835 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637736826 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_342370 |
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| Protein GI | 77163845 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACTC CTGGAGTACA GATCATAATG AGCGGTCTGG TCCGCCGTTT AGTAGAGGAT
GGATTGCTTA GCGAAGCCAA TGCCCGGCAA GCCCAAGAGC ATTCCCGCAA GAACGGTACT
CCTTTAGTGA CTTACCTGGT ACGGCAAAAG CTACTTAAAA GTCTGGATAT TGGTCAAGCA
GCCTCCCAGG AATTCGGCGT CCCCCTCTTC GATATCAATG CCCTGGATTT GGATTATCTT
CCCAAAGGGC TAGTGGAAGA AAAATTGGTT CGCCAACACC AGGCACTACC CTTATTCAAG
CGTGGGAATC GTCTATTCGT TGCCGTGGCC GATCCCACCA ACCTGCAAGC ATTAGACGAA
ATCAAGTTCC ATACGGGAAT TAATACCGAA GCTATCCTTG TTGAAGAAGA CAAACTAGCA
CGAATGATCG ATCGGGCCAT GGAGGCCCAA GACACTTCCT TAGCGGAGCT AAACGATACG
GCACTAGATG ACCTTGACAT CTCCGGGGGT GAAAATGAGC CTCCAGAAAA TACTGCTGAA
TCGGAGGCTG ATGATACCCC AGTAGTTCGT TTTATTAATA AGGTTCTGTT GGATGCTATT
CATCAGGGAG CATCGGATAT TCATTTTGAG CCCTATGAAA AAATCTATCG GGTCCGATAT
CGGCAAGATG GGGTGCTGCG GGAAGTCGCT ACCCCGCCGG TTACTCTGGC CGGCCGGCTA
GCAGCCCGCC TCAAGGTCAT GGCTCGCTTG GATATTTCCG AACGGCGCGT ACCTCAAGAT
GGGCGCATGA AAATGAATAT TTCCAAGAAC CGTGCCATTG ATTTTCGGGT AAATAGCTGC
CCCACCTTAT TCGGCGAAAA AATTGTTCTT CGTATCCTGG ACCCCTCCAG CGCGCAAATG
GGAATCGAGG CACTGGGTTA TGAAGAAAGA CAACAACAAA TATTTCTAGA AACCATTCAC
CGCCCTTATG GGATGGTGCT CGTTACCGGC CCCACGGGTA GTGGTAAAAC GGTATCTCTT
TATACCGCGC TTAATATTCT TAATACCGCG GACCGTAATA TCTCCACTGC CGAAGATCCA
GCCGAAATCA ATCTGCCTGG TATTAACCAG GTCAATGTCT ACCCCAAAGT CGGTTTGACT
TTTGCCGGTG CCCTTAAAGC CTTCTTACGT CAGGACCCCG ATGTCATCAT GGTGGGGGAA
ATTCGTGATC TGGAAACGGC TGAAATTGCT ATTAAAGCTG CCCAAACCGG CCATATGGTG
CTTTCCACCC TTCATACCAA CGACGCGCCC CAAACCCTGA CCCGGCTATT AAACATGGGG
GTGGCGTCCT ATAACATTGC CTCGGCAGTT TCTTTGATCA TCGCCCAACG CCTGGCCCGG
CGTCTCTGCT CCCGCTGCAA GGCACCCGAA AAGATATCCC ACGAAGTGCT GCTAGAAGAG
GGTTTTACCA AAACCCAACT GGAAACCACG CCCACCCTTT ATAAGGCCGC AGGCTGCGAG
CACTGTACAA AAGGCTATAA AGGCCGCGTG GGCATCTATC AGGTCATGCC CGTATCGGAA
GAGATGGGCC GCATCATTAT GGCGGGAGGC AACTCCATGG AACTTGCGGA GCAGTCAAAA
AAAGAAGGCG TCGCCGATCT CCGCCAATCG GGGCTTAAAA AAATTATTGA TGGCGTGACT
AGTATAGAGG AAATCAACCG AGTGACGAAG GAGTAA
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| Protein sequence | MATPGVQIIM SGLVRRLVED GLLSEANARQ AQEHSRKNGT PLVTYLVRQK LLKSLDIGQA
ASQEFGVPLF DINALDLDYL PKGLVEEKLV RQHQALPLFK RGNRLFVAVA DPTNLQALDE
IKFHTGINTE AILVEEDKLA RMIDRAMEAQ DTSLAELNDT ALDDLDISGG ENEPPENTAE
SEADDTPVVR FINKVLLDAI HQGASDIHFE PYEKIYRVRY RQDGVLREVA TPPVTLAGRL
AARLKVMARL DISERRVPQD GRMKMNISKN RAIDFRVNSC PTLFGEKIVL RILDPSSAQM
GIEALGYEER QQQIFLETIH RPYGMVLVTG PTGSGKTVSL YTALNILNTA DRNISTAEDP
AEINLPGINQ VNVYPKVGLT FAGALKAFLR QDPDVIMVGE IRDLETAEIA IKAAQTGHMV
LSTLHTNDAP QTLTRLLNMG VASYNIASAV SLIIAQRLAR RLCSRCKAPE KISHEVLLEE
GFTKTQLETT PTLYKAAGCE HCTKGYKGRV GIYQVMPVSE EMGRIIMAGG NSMELAEQSK
KEGVADLRQS GLKKIIDGVT SIEEINRVTK E
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