| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0311 |
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| Symbol | |
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| ID | 3706482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 336895 |
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| End bp | 338115 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637736825 |
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| Product | type II secretion system protein F |
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| Protein accession | YP_342369 |
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| Protein GI | 77163844 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAG CGGCAGCAAA ACAGCAAATT TTTATATGGG AAGGCGCTAA CCGGCAAGGA
CATAAAATTA AAGGCGAAGT AGGCGGTAAA AACCTCAGCA TGGTGAAGGC GGATCTGCGA
CGCCAGGGTA TTGTGCCCCT CAAGGTGCGC AAAAAGCCTA AGTCTCTGCT CGGTCAGCGC
AAGAAAAAAA TCACCCCGAA GGAGATCGCG ATATTTAGCC GTCAACTTGC AACCATGATG
GCCGCGGGCG TACCCCTGGT TCAAGCCTTC GAAATTATAG GCCGCGGCCA TGAAAGCATC
TCCATGCAAG AGATGGTCCT AAAAATCAAG GGGGAAGTGG AAGGTGGCGG CACCTTGGCC
GAAGCGCTTA AACAACATCC ACGGCAATTT GATCCGCTTT TTTGCAACCT GGTCCACGCG
GGAGAGCAAT CCGGCACTCT AGAAACGCTG CTGGATAAAA TCGCCATGTA TAAAGAAAAA
ACAGAAGCCA TCAAGGGAAA GATAAAAAAA GCATTATTTT ATCCTACCGC TGTGGTGGTG
GTCGCTTTTA TTATTACTGC TATTTTGCTC ATCTTTGTTA TTCCCCAATT TGAGGCTTTG
TTCCAGAACT TCGGCGCCGA TCTGCCCGCC CTCACCTTGC TAGTCCTCAA GCTTTCCGCT
CTTTTTCAAG AATGGTGGTG GGCCATTTTC GGAGCTATGG GAGGCGCTAT CTACGGTCTT
ATGGAGGCTA AACGGCGCTC GCAAAAGATT AACCATCTCT TCGATAGACT ACTACTCAAA
TTGCCGGTGA TCGGCGAAAT CCTGAATAAG GCAACTATCG CCCGGTATGC CCGCACCCTC
TCCACCATGT TTGCGGCCGG CGTCCCCTTG GTGGAAGCCA TGGTTTCCGT GGCCGGCGCT
GCGGGTAATT CTGTCTATAC TCAAGCCATC CTCCGTATAC GCGATGAGGT CTCCACCGGC
ACCCAGCTAC AAGCGGCTAT GCGCAGTAGC CAATTATTTC CTAACATGGT GGTGCAGATG
GTGGCTATCG GGGAAGAGGC GGGTTCAATT GATCAAATGC TGAGCAAAGT GGCGGATTTC
TACGAAGAAG AAGTAGATAA TGCGGTCGAT GCCCTGAGCA GCTTGCTAGA ACCCCTCATC
ATGGCAATAC TAGGCGTTCT GGTAGGCGGC CTTGTTATCG CAATGTACTT ACCCATCTTC
AAAATGGGTT CAGTAGTTTA A
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| Protein sequence | MAQAAAKQQI FIWEGANRQG HKIKGEVGGK NLSMVKADLR RQGIVPLKVR KKPKSLLGQR
KKKITPKEIA IFSRQLATMM AAGVPLVQAF EIIGRGHESI SMQEMVLKIK GEVEGGGTLA
EALKQHPRQF DPLFCNLVHA GEQSGTLETL LDKIAMYKEK TEAIKGKIKK ALFYPTAVVV
VAFIITAILL IFVIPQFEAL FQNFGADLPA LTLLVLKLSA LFQEWWWAIF GAMGGAIYGL
MEAKRRSQKI NHLFDRLLLK LPVIGEILNK ATIARYARTL STMFAAGVPL VEAMVSVAGA
AGNSVYTQAI LRIRDEVSTG TQLQAAMRSS QLFPNMVVQM VAIGEEAGSI DQMLSKVADF
YEEEVDNAVD ALSSLLEPLI MAILGVLVGG LVIAMYLPIF KMGSVV
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