Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0302 |
Symbol | aspS |
ID | 3706473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 330232 |
End bp | 332019 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637736816 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_342360 |
Protein GI | 77163835 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0234684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAGCC ACTATTGCGG CGAACTTTCC GAGGCCCATC TTGATCAAAG TGTCACTTTA TGCGGCTGGG TAAATCGCCG CCGAGATCAT GGTGGGGTAA TTTTTATTGA TCTTCGTGAT CGGGAGGGCC TCATTCAATT GGTTTTTGAT CCAGAGTATT CTCCGGAAAG CTTTAGGCAT GCCGAACAGA TACGGAGTGA ATATGTGCTT CAGGTCAAGG GCCGGGTACA GCACCGGCCG GAAGGCACCG AAAATCCAGA TCTCAAGACA GGCCAAGTGG AAGTATTGGG TCAGGAACTC ATTTTACTTA ATGCTTCGGA AACGCCGCCT TTTCCAGTGG ATGAAAAATT AGAGGTGGGC GAAGACATCC GGCTGCGCTA TCGTTATATT GACCTCCGGC GGCCAGAAAG CTTGCAGCGC CTGCGGTTCC GTTCCGCCAT TATTCGGCAA TTGCGCAAGT TTTTGGATGA GCGGGGTTTT CTCGATATTG ATACGCCCAT TCTCACCCAG TCAACGCCAG AGGGCGCCCG GGATTTTTTG GTGCCAAGCC GTACCCATCC CGGCCAATTT TTTGCCTTGC CTCAGTCCCC CCAGTTATTT AAACAGCTCC TCATGGTTGC TGGGGTGGAT CGCTACTATC AAGTAGTGCG CTGTTTTCGT GATGAAGATC TACGGGCCGA TCGCCAGCCG GAATTTACGC AGCTCGACAT AGAGGCTTCC TTCCTTCATG AGGAGACGCT TATGGCGTTA ATGGAAGAGA TGTTCAAGGA GCTGTTTGCC ACGGTATTAG AAGTGCCCCT CCATACCCCC TTTGTCCGGA TGCCCTATGC CGAAGCCCTG GCCTGTTTTG GTTTAGATAA ACCTGATTTG CGCATTCCCC TGCGATTGGT AGAGGTGGGG GATTTGATGA AAACAGTGGA TTTTAAGGTT TTTGCCCAGC CAGCCCAGGA TCGGGATGGA CGAGTCGCCG CATTGAGATT GCCCGGCGGC GGCAAACTTA GCCGTAAAGA AATTGAGGAG TATACTCAAT TTGTGGCTAT CTACGGCGCC AAGGGTTTGG CTTATATTAA AGTGGTTGAG CGCAGCCGCG GGCGGGAGGG ATTGCAGTCC CCTATCCTCA AGTTTTTGCC CGATGAAGTG ATTGGAGCCA TGCTGGAACG AACGGAAGCT GAAAATGGAG ATATCGTATT TTTCGGTGCT GATAAAGCGT CCATTGTTAA TGAATCCCTT GGAGCCTTGC GAGTGAAATT AGGCCACGAT CATGGCTTGG TAGAGCATGG CTGGAGTCCG CTATGGGTCA TAGATTTTCC TATGTTCGAG TGGGATGAGG ATGACCACCG TTGGCATGCC TTGCATCACC CTTTTACTTC TCCCAAAGAA GAAGATCTCT CCTTATTGGA GCAGAATCCG GGAGCTTGCC GCTCCCGTGC CTATGATTTA GTGCTCAATG GTACCGAGGT GGGCGGGGGA TCCATCCGCA TTTCCCAGTC CCAAGTGCAG AGTCAAGTGT TTCGCTTGCT AGGTATTGGC GATGAGGAAG CCCAAGATAA ATTTGGATTT CTTTTGGACG CGCTGAAATA TGGCTGCCCG CCCCATGGTG GGATTGCGTT TGGTTTGGAT CGGCTGGTCA TGCTGATGAC TGGAAGCGCC TCGATCCGGG AGGTCATCCC GTTTCCCAAG ACCCAGACGG CGGCTTGCCC GCTTACCGGC GCGCCAGGCC AGGTTGCGGA AGCGCAGTTG CGGGAGTTGG GGATTGGCGT GCGCAGGCTA GCTTCGGATA AAGTCTAA
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Protein sequence | MRSHYCGELS EAHLDQSVTL CGWVNRRRDH GGVIFIDLRD REGLIQLVFD PEYSPESFRH AEQIRSEYVL QVKGRVQHRP EGTENPDLKT GQVEVLGQEL ILLNASETPP FPVDEKLEVG EDIRLRYRYI DLRRPESLQR LRFRSAIIRQ LRKFLDERGF LDIDTPILTQ STPEGARDFL VPSRTHPGQF FALPQSPQLF KQLLMVAGVD RYYQVVRCFR DEDLRADRQP EFTQLDIEAS FLHEETLMAL MEEMFKELFA TVLEVPLHTP FVRMPYAEAL ACFGLDKPDL RIPLRLVEVG DLMKTVDFKV FAQPAQDRDG RVAALRLPGG GKLSRKEIEE YTQFVAIYGA KGLAYIKVVE RSRGREGLQS PILKFLPDEV IGAMLERTEA ENGDIVFFGA DKASIVNESL GALRVKLGHD HGLVEHGWSP LWVIDFPMFE WDEDDHRWHA LHHPFTSPKE EDLSLLEQNP GACRSRAYDL VLNGTEVGGG SIRISQSQVQ SQVFRLLGIG DEEAQDKFGF LLDALKYGCP PHGGIAFGLD RLVMLMTGSA SIREVIPFPK TQTAACPLTG APGQVAEAQL RELGIGVRRL ASDKV
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