Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0296 |
Symbol | |
ID | 3706467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 325563 |
End bp | 326207 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637736811 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_342355 |
Protein GI | 77163830 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.351442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTTT CACCTGGTAA ACGTTCTGTA ACGGCCTTAT TTTCGGATCC CTTGTGCCCG TTTTGCCACC GTACTCGCAT TGTCGTCGCG GAAAAAAATA TTTCCGCTGA GATTATTGAT ATAGATCCAG CTAACTTACC TGAAGATTTG GTTCGGCTTA ATCCTCATAA TTCCGCTCCT ACACTGGTAG CCCGGGATCT AATTCTGTAC GACTCAAAAG TCATTATGGA ATATTTCGAC GAGCGATTCC CTCATCCTCC CCTCATGCCA GTAGATCCAA TTTCCAGAGC GCGGATCCGA CTCATGTTTT ACCGTATTGA TCAAGACTGG TACCGTTTGC TTGGCGGTAC CAAAACCCAT CGCTCTAATA TATCGTCTAA GACACGCAAA ATGCTGATTG AAGATCTCAC CATACTAAGT CCGACCTTCG AGAAAACGCC CTTCTTCATG AATGAAGAAT TTTCCCTATT AGACTGCGCC TTGGCACCTC TACTATGGCG GCTGCTCGCT CTGGAAGCTG AACTCCCCCC CCAAGCCAAG CTTGTGGAAG ATTATGCTAA TCGTATGTTT GCCCGTGATT CATTTCAACA AAGTCTGAGC GCCGCTGAAC GGGCAATGCG AACCAAAGCC ACCAGCCCTA TCTGA
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Protein sequence | MPLSPGKRSV TALFSDPLCP FCHRTRIVVA EKNISAEIID IDPANLPEDL VRLNPHNSAP TLVARDLILY DSKVIMEYFD ERFPHPPLMP VDPISRARIR LMFYRIDQDW YRLLGGTKTH RSNISSKTRK MLIEDLTILS PTFEKTPFFM NEEFSLLDCA LAPLLWRLLA LEAELPPQAK LVEDYANRMF ARDSFQQSLS AAERAMRTKA TSPI
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