Gene Noc_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0278 
Symbol 
ID3706449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp307626 
End bp307937 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID637736794 
Productperiplasmic or secreted lipoprotein 
Protein accessionYP_342338 
Protein GI77163813 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.406104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC CAATTAAATA TATAGGATTT ATGCTAATCG TTTTTATGGC TGTTTTAATG 
CTAGGCTGCG CCGACAGCCC TAAGCAGAGC GCGGGAGGAT ACGTTGACGA TGCCTGGATC
ACCTCAAAGG TTAAGAGCTC TTTACTCTCC GATCCACTGG TTAGTGGCAC TGATGTTGAG
GTAAACACTT ACCAAGGCGT GGTGCAGCTA AGCGGGTTTG TGGCGACCGA GGAACAATCC
GAGGAAGCGG AAAGGATTAC TCGGAGTATT AAAGGAGTCA AGGATGTTGA AAATAAGATC
ACAGTGAAAT AA
 
Protein sequence
MKNPIKYIGF MLIVFMAVLM LGCADSPKQS AGGYVDDAWI TSKVKSSLLS DPLVSGTDVE 
VNTYQGVVQL SGFVATEEQS EEAERITRSI KGVKDVENKI TVK