Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0268 |
Symbol | |
ID | 3706439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 295857 |
End bp | 297677 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637736784 |
Product | transketolase |
Protein accession | YP_342328 |
Protein GI | 77163803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAT CACTCCAGAA TACAGCCCAA CAACTGCGCC GCCTGGTTAT CCGGATGACC ACCGAGGCTG GCTCGGGCCA TCCCACTTCC TGCCTCTCCT GCGCGGAAAT TGTCGCTGCT TTATTTTTCC ATGAAATGCG CTGGGACCCT AGCGATCCTA AAGCCCGTAA TGTAGATACC TTTATCCTCT CCAAAGGCCA TGCCGCCCCT ATTCTATGGG CTGCCCTGTG GGAAGCGAAA GCCATCCATG AAGATCCCCT CTCCCTGCGT AAATTAGACA GCTCTCTGGA AGGCCACCCT ACGCCTAACA ACCCGTGGGT CAAGGTAGCT ACCGGCTCGT TGGGCCAGGG TCTAGCGGCA GCCAATGGCA TAGCGCTGGC CAATCGCTTG GACGGTATTG ATGCCCGGAT CTACTGCCTG CTTGGAGATG GGGAATGCTC GGAGGGTTCC GTTTGGGAAG CTGCTCAATT CGCTTCTTTA AACCACCTGT CCAATCTGGT AGCCATTGTG GATGTGAATG CCCTGGCTCA AAGCGGTCCT GCACCCTACC AACATGATAT AGAGGTATTT AGCCGCCGTT TTCAATCCTT CGGCTGGGAA ACCATCACCA TTGATGGTCA TGATCTGGGG GCTATCCTCA GTGCCCTGGA GCAAGCTAAA AAAACTGGAC CGACGGCCAT CATCGCCAAG ACCGAGAAGG GGAAAGGAGT CTCCTTTCTG GAGGGAAAAG AGGGTTGGCA TGGAAAACCC CTAAGCCAGG AAGAAATGGA AAAAGCCCTG GCGGAGCTCG GTGAAGACCA GGCTGTCGCT CCCCTGGAGC CTCGCCGTGT GGGCCACTAC ACGCCTCCTC CCCAACAAAA AAAACCAACG CCTGCGCTTG CTGTTGACTA CGCCCTGGGG GATCAGGCTG CTACCCGTGA TGGTTTTGGC AACGCGCTGA AAAAACTTGG CGAGCTCCTT CCCGAACTAG TAGTCCTGGA TGGAGATGTC AAAAATTCCA CCCGAACGGA ATATTTCGCT GAAGCCTATC CCGATCGATT CTTTGAAAGT TATATCGCCG AACAAAATAT GGCGGGTACC GCCCTCGGGC TGGCCGCCTA TGGCAAAATT GCCTGCGCGA CCAGTTTTGC CTGCTTCCTC AGCCGGGCCT ATGATTTTAT CCGGATGGCC GGTCATAGCC GGCCATCCCA TCTCATTTTT TGCGGCAGCC ATGCCGGTGT TTCCATTGGC AAGGACGGCC CCTCCCAGAT GGGATTAGAA GATTTAGCCA TGTTCCGGGC AGTCTCTGGC AGCACTATTT TGTATCCTTG CGATGGAGTC AGTGCCGAAC GTTTGACCCA ACAGGTAACC AAGGCTCAAG GTATCGTCTA TATCCGCACG ACCCGGGGCA AAACCCCAGT GATCTATGCC AATGACGAGG AATTCCCCGT CGGTGGCAGC AAAACCTTAT GCGCTTCAAA AGAAGATAAG TTTACTATTA TCGCAGCGGG GATCACCGTG CATGAAGCGC TTGCCGCCTA CGAGGAACTT AAAAGTAAGG AAATCCTCGT GCGGATCATC GATGCCTATT CCATCAAACC TCTGGACCAA GAAACGCTTG CCAAAGCCGC CCATGAAACC CAAGGAATCA TTACCGTCGA GGATCATTGG ATCGACGGTG GTCTCGGTGA TGCAGTGGCC GCCACCGTCA GTGCCCTCGC GCCAGTGCAT AGACTTGCTA TCACTGCGGA GCCCCGCTCC GGAAAGCCGG AAGAATTGTT AGAGCGATAT GGAATTTCAC AGCAGGCCAT CACGCGGAAA ATTCTGGAAC TCATGGATTA A
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Protein sequence | MMKSLQNTAQ QLRRLVIRMT TEAGSGHPTS CLSCAEIVAA LFFHEMRWDP SDPKARNVDT FILSKGHAAP ILWAALWEAK AIHEDPLSLR KLDSSLEGHP TPNNPWVKVA TGSLGQGLAA ANGIALANRL DGIDARIYCL LGDGECSEGS VWEAAQFASL NHLSNLVAIV DVNALAQSGP APYQHDIEVF SRRFQSFGWE TITIDGHDLG AILSALEQAK KTGPTAIIAK TEKGKGVSFL EGKEGWHGKP LSQEEMEKAL AELGEDQAVA PLEPRRVGHY TPPPQQKKPT PALAVDYALG DQAATRDGFG NALKKLGELL PELVVLDGDV KNSTRTEYFA EAYPDRFFES YIAEQNMAGT ALGLAAYGKI ACATSFACFL SRAYDFIRMA GHSRPSHLIF CGSHAGVSIG KDGPSQMGLE DLAMFRAVSG STILYPCDGV SAERLTQQVT KAQGIVYIRT TRGKTPVIYA NDEEFPVGGS KTLCASKEDK FTIIAAGITV HEALAAYEEL KSKEILVRII DAYSIKPLDQ ETLAKAAHET QGIITVEDHW IDGGLGDAVA ATVSALAPVH RLAITAEPRS GKPEELLERY GISQQAITRK ILELMD
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