Gene Noc_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0268 
Symbol 
ID3706439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp295857 
End bp297677 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content54% 
IMG OID637736784 
Producttransketolase 
Protein accessionYP_342328 
Protein GI77163803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT CACTCCAGAA TACAGCCCAA CAACTGCGCC GCCTGGTTAT CCGGATGACC 
ACCGAGGCTG GCTCGGGCCA TCCCACTTCC TGCCTCTCCT GCGCGGAAAT TGTCGCTGCT
TTATTTTTCC ATGAAATGCG CTGGGACCCT AGCGATCCTA AAGCCCGTAA TGTAGATACC
TTTATCCTCT CCAAAGGCCA TGCCGCCCCT ATTCTATGGG CTGCCCTGTG GGAAGCGAAA
GCCATCCATG AAGATCCCCT CTCCCTGCGT AAATTAGACA GCTCTCTGGA AGGCCACCCT
ACGCCTAACA ACCCGTGGGT CAAGGTAGCT ACCGGCTCGT TGGGCCAGGG TCTAGCGGCA
GCCAATGGCA TAGCGCTGGC CAATCGCTTG GACGGTATTG ATGCCCGGAT CTACTGCCTG
CTTGGAGATG GGGAATGCTC GGAGGGTTCC GTTTGGGAAG CTGCTCAATT CGCTTCTTTA
AACCACCTGT CCAATCTGGT AGCCATTGTG GATGTGAATG CCCTGGCTCA AAGCGGTCCT
GCACCCTACC AACATGATAT AGAGGTATTT AGCCGCCGTT TTCAATCCTT CGGCTGGGAA
ACCATCACCA TTGATGGTCA TGATCTGGGG GCTATCCTCA GTGCCCTGGA GCAAGCTAAA
AAAACTGGAC CGACGGCCAT CATCGCCAAG ACCGAGAAGG GGAAAGGAGT CTCCTTTCTG
GAGGGAAAAG AGGGTTGGCA TGGAAAACCC CTAAGCCAGG AAGAAATGGA AAAAGCCCTG
GCGGAGCTCG GTGAAGACCA GGCTGTCGCT CCCCTGGAGC CTCGCCGTGT GGGCCACTAC
ACGCCTCCTC CCCAACAAAA AAAACCAACG CCTGCGCTTG CTGTTGACTA CGCCCTGGGG
GATCAGGCTG CTACCCGTGA TGGTTTTGGC AACGCGCTGA AAAAACTTGG CGAGCTCCTT
CCCGAACTAG TAGTCCTGGA TGGAGATGTC AAAAATTCCA CCCGAACGGA ATATTTCGCT
GAAGCCTATC CCGATCGATT CTTTGAAAGT TATATCGCCG AACAAAATAT GGCGGGTACC
GCCCTCGGGC TGGCCGCCTA TGGCAAAATT GCCTGCGCGA CCAGTTTTGC CTGCTTCCTC
AGCCGGGCCT ATGATTTTAT CCGGATGGCC GGTCATAGCC GGCCATCCCA TCTCATTTTT
TGCGGCAGCC ATGCCGGTGT TTCCATTGGC AAGGACGGCC CCTCCCAGAT GGGATTAGAA
GATTTAGCCA TGTTCCGGGC AGTCTCTGGC AGCACTATTT TGTATCCTTG CGATGGAGTC
AGTGCCGAAC GTTTGACCCA ACAGGTAACC AAGGCTCAAG GTATCGTCTA TATCCGCACG
ACCCGGGGCA AAACCCCAGT GATCTATGCC AATGACGAGG AATTCCCCGT CGGTGGCAGC
AAAACCTTAT GCGCTTCAAA AGAAGATAAG TTTACTATTA TCGCAGCGGG GATCACCGTG
CATGAAGCGC TTGCCGCCTA CGAGGAACTT AAAAGTAAGG AAATCCTCGT GCGGATCATC
GATGCCTATT CCATCAAACC TCTGGACCAA GAAACGCTTG CCAAAGCCGC CCATGAAACC
CAAGGAATCA TTACCGTCGA GGATCATTGG ATCGACGGTG GTCTCGGTGA TGCAGTGGCC
GCCACCGTCA GTGCCCTCGC GCCAGTGCAT AGACTTGCTA TCACTGCGGA GCCCCGCTCC
GGAAAGCCGG AAGAATTGTT AGAGCGATAT GGAATTTCAC AGCAGGCCAT CACGCGGAAA
ATTCTGGAAC TCATGGATTA A
 
Protein sequence
MMKSLQNTAQ QLRRLVIRMT TEAGSGHPTS CLSCAEIVAA LFFHEMRWDP SDPKARNVDT 
FILSKGHAAP ILWAALWEAK AIHEDPLSLR KLDSSLEGHP TPNNPWVKVA TGSLGQGLAA
ANGIALANRL DGIDARIYCL LGDGECSEGS VWEAAQFASL NHLSNLVAIV DVNALAQSGP
APYQHDIEVF SRRFQSFGWE TITIDGHDLG AILSALEQAK KTGPTAIIAK TEKGKGVSFL
EGKEGWHGKP LSQEEMEKAL AELGEDQAVA PLEPRRVGHY TPPPQQKKPT PALAVDYALG
DQAATRDGFG NALKKLGELL PELVVLDGDV KNSTRTEYFA EAYPDRFFES YIAEQNMAGT
ALGLAAYGKI ACATSFACFL SRAYDFIRMA GHSRPSHLIF CGSHAGVSIG KDGPSQMGLE
DLAMFRAVSG STILYPCDGV SAERLTQQVT KAQGIVYIRT TRGKTPVIYA NDEEFPVGGS
KTLCASKEDK FTIIAAGITV HEALAAYEEL KSKEILVRII DAYSIKPLDQ ETLAKAAHET
QGIITVEDHW IDGGLGDAVA ATVSALAPVH RLAITAEPRS GKPEELLERY GISQQAITRK
ILELMD