Gene Noc_0253 details

Gene Information

• Locus tag: Noc_0253
• Symbol: aroB
• ID: 3706327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 279084
• End bp: 280163
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637736769
• Product: 3-dehydroquinate synthase
• Protein accession: YP_342313
• Protein GI: 77163788
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACAG TACAAGTCGA TCTTCAAGAG CGTAGCTATC CTATCTATAT TGGCAGCGGC 
CTACTAAAAC AAAATTCCCT TTTAGCAAAA CATATCGTGG GATCTGAAGT CATGGTAGTC 
ACTAATGAGA CGGTGGCTCC ATTATATTTA GATACTCTCT TGAAGGGCCT CAAAGATTAT 
CGATGTGCCG AAATCATTTT ACCTGACGGC GAGCAGCATA AGACTTTGGC AGTGCTGCAG 
CAAATCTTTG ATGATCTGCT TAAAGTGCCC TTCTCCCGGC ATTGCACGGT GATTGCATTA 
GGTGGGGGAG TAATCGGTGA TATGGCAGGC TTTGCCGCTG CCTGTTACCA ACGGGGAGTC 
GCTTATATTC AGGTTCCCAC CACCTTGTTA GCGCAGGTAG ATTCCTCTGT TGGGGGAAAA 
ACAGCGGTGA ATCATCCTCT AGGCAAGAAT ATGATCGGGG CCTTTTACCA GCCTCGCTGC 
GTTTTAGCGG ATACAGATAC TCTCGATACT CTTGATGAGC GGCAGCTGCG GGCGGGATTA 
GCTGAAGTCA TAAAATACGG CCTTATCAGA GATATCGACT TCTTTACCTG GCTAGAGGAG 
CATGCCAGCG AAGTATTGGC GCGAGAGCCT TCAGCATTGA TCCATGCCAT TGAACGATCT 
TGTCGTAATA AAGCCGAGAT AGTCGCCGCC GATGAACGGG AATCAGGGGT GCGGGCGATT 
CTCAATCTAG GCCATACTTT TGGCCATGCC ATTGAAACAG GGCTGGGCTA TGGTGCCTGG 
CTACATGGCG AGGCCGTTGC GGCGGGGATG GCAATGGCGG CGGATTTATC GCAGCGGTTG 
GGATGGCTGT CGGCCACGGA AGTAGGCCGG GTGCTCAATT TACTGGAGCG GGCGGGCCTT 
CCCCGGCATT CTCCCGAAGC CATCCATAAG GCTCGTTTCC TGGAGTTGAT GGCAGTAGAT 
AAAAAAGTCA TTGATGGATG TTTACGCCTA GTCTTACTAA GGCAGCTGGG ACAAGCTGTC 
GTCACCGATG GTTTTGATTC TGATTTGCTC GAAGCCACAA TAGACAAGGC CACCGTTTGA 

 

Protein sequence

MITVQVDLQE RSYPIYIGSG LLKQNSLLAK HIVGSEVMVV TNETVAPLYL DTLLKGLKDY 
RCAEIILPDG EQHKTLAVLQ QIFDDLLKVP FSRHCTVIAL GGGVIGDMAG FAAACYQRGV 
AYIQVPTTLL AQVDSSVGGK TAVNHPLGKN MIGAFYQPRC VLADTDTLDT LDERQLRAGL 
AEVIKYGLIR DIDFFTWLEE HASEVLAREP SALIHAIERS CRNKAEIVAA DERESGVRAI 
LNLGHTFGHA IETGLGYGAW LHGEAVAAGM AMAADLSQRL GWLSATEVGR VLNLLERAGL 
PRHSPEAIHK ARFLELMAVD KKVIDGCLRL VLLRQLGQAV VTDGFDSDLL EATIDKATV