| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0250 |
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| Symbol | |
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| ID | 3706324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 275447 |
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| End bp | 276025 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637736766 |
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| Product | pilus assembly protein, PilQ |
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| Protein accession | YP_342310 |
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| Protein GI | 77163785 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.624121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTATA CGAGGCATAT TAAAAGGTGG ACGATATTGA ATCGTCAGGT AGGAATTGCA
AGTTTGCTTG GTATCTTCTC TGTAACATTA TCAGGTTGTA ATGATGAAGA GATGATAGAT
CTGAAGCAAT ATGTGCAGCA GGTGAAATCT CGCCCTCGGG GAATTATTGA ATCCTTGCCA
GAAATAAAAC CCCACGAAAC CTTTATCTAT CAAGCAGCAG AACTTCGCAA CCCCTTTGTC
TCTGCCGTCG TAGATCTTCC GTTGGAAACC ATCGCGCAGG CCAGCCCCAC GCTTGAAAAT
ACCCTTAAAC CTAACCTAAA GCGGCATAAA GAGATTTTGG AGGAATATGC TCTCGAGTCT
CTCAGAATGG TTGGTATGCT TGAACAGGGA ATGGAAATTT GGGCCATTAT ACGTGCCTCT
GATGGGATTT TATACCGTGT AAAAAAAGGC AATCATATAG GACGAAACTA TGGAAAGATT
ACTCATATTA ATGAAGAAAA AATTGAATTC ACCGAAATTG TTCCTGACGA ACAAGGTGGT
TGGTTAACAC GCCAGAATAT GCTGGCATTA GCGGAATAA
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| Protein sequence | MSYTRHIKRW TILNRQVGIA SLLGIFSVTL SGCNDEEMID LKQYVQQVKS RPRGIIESLP
EIKPHETFIY QAAELRNPFV SAVVDLPLET IAQASPTLEN TLKPNLKRHK EILEEYALES
LRMVGMLEQG MEIWAIIRAS DGILYRVKKG NHIGRNYGKI THINEEKIEF TEIVPDEQGG
WLTRQNMLAL AE
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