| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0246 |
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| Symbol | |
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| ID | 3706301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 270470 |
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| End bp | 272914 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637736762 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_342306 |
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| Protein GI | 77163781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATATC TCCTTCGCCT ATTCCGCTGG ATGGTGCTCT TGTTGCTTAC CGCCACAACA
GTTGGTATCC TTGTTGCTGT GGGGATGTAT TTTTATCTCT TACCTCAGCT ACCCTCTACT
GATACTCTTA AGAACATTCA TCTCCAAGTT CCCCTCAGAA TTTATTCCCA CGATAAGAAA
CTTATTGCTC AATATGGAGA AAAACGCCGT ATTCCGCTAG CTTTCGAACA ATTTCCAGAT
CTGCTGGTCA AAGCTATATT GGCTGCAGAG GATGATCGTT TCTATGAGCA CCCGGGTGTC
GATTATCAAG GTATCCTTCG CGCTGCCTTA TATCTGGTAA AAACGGGCAA AAAAGCCCAA
GGCGGCAGCA CTATTACTAT GCAAGTTGCC CGTAATTTTT TCTTAAGTAG AGAAAAAACC
TACCTACGTA AATTTAATGA AATACTGCTT GCCCTCCAGA TCGAACGAGA ACTTAGTAAA
CAGGACATCA TCGAGCTCTA TCTAAATAAG ATTTACCTTG GCAATCGCGC TTATGGCGCT
GCAGCCGCTG CCCAGGTATA TTACGGCACG ACTCTGGATA AACTTGAGCT ATCGCAGCTC
GCTATGATTG CTGGTTTACC GAAAGCACCT TCCCGGTATA ATCCTATAGC AAACCAGAAA
CGAGCTCTGC TACGGAGAAA TTATGTACTC CGGCGTATGC GTGAAGTTGG ATATATAGAT
CCTGAAACCT ATCAGGATGC AGCAGCTCAG CCCGCTACGG CAAAATTTCA TGAATTGCCT
ATCGAGCTAA ACGCCCCTTT CGTAGCAGAA ATGGCACGAA GCCAAATGTT TGAAAAATAT
GGCTCTGATA TTTATACGGC TGGGTATAAT GTTTATACAA CAATCAAAGC AGAGCATCAG
AAAGCTGCAA ATGACGCCTT ACGAAAGGCT CTGCTTGACT ATGATCGACG GCATGGTTTT
CGCGGGCCAG AACGGCATAT CGAATTGCCG GTAGACGCCG GCGAGATATT CTATCAGCAG
GCTCTCTCGC AACGCAGATT AGCCAATGGT CTAGTGCCAG CCCTGGTACT AGCGACGGAC
GAACGAACTA GCCGGATTTA CACAAAAACC GACGGTGAGG CTATGCTCAC CTGGGAAGGG
CTATCTTGGG CCCAGCCCTA TCTCGAAGTC AACGCAGTCG GGGAAAAACC AAAGCAGGCC
GCAGATATTC TCAAAGCAGG GGATCTTATT TGGGTGGAAG CACTACCTAA GGGAGGGTGG
CGGCTAGCGC AAAGACCTCG CGTAGAGGGC GCCATTGTGT CACTCTCTCC TTACAATGGA
AACATCACCG CGCTTAGTGG GGGCTTTGAT TTTTATGAAA GTAAATTTAA TCGAGCTACC
CAATCTCAAC GGCAACCAGG GTCTAGTTTC AAGCCGTTTC TCTATTCCGC TGCCCTCAAT
AAAGGCTATA CTGCCGCGAG CATTATCAAT GATGCTCCTA TAGTATTGGA TGAACCTGGT
GGGCCAGACA ATGCCTGGCG GCCGGAAAAT TATAGCGGAC GTTTTTACGG TCCCACGCGT
CTTAGAACAG CCTTGACCCA CTCCAGAAAC CTGGTTTCTA TTCGATTGCT GCGGGCCATA
GGCATTGATT ATGCCATCGA ATATATACAA AATTTTGGAT TTAAAGCTGA ACAATTGCCC
CAAAGTTTAT CCTTGGCACT AGGCAGCGGT AGTGCTTCTC CTCTAGAGAT GGCCCGCGGT
TTTGCCGTCT TCGCCAACGG GGGCTATCTT ATCGAGCCCT ACCTGATTGA GCGAACCGAG
AATGCGGATG GAAAAATTAT TTTTCGATCG CGCCCAGCCC AAGTTTGCCA ACGCTGCGAA
AAAATAAAGA CGGAACGAAC ACAAGCCTAT AATCCAACCC TCACTGCTGA CCTACTAAAT
ACCGAATCCG CTCAATTCAA CCCGGCTCCT CGGGCAATCA CAGCACAAAA TGCCTATCTT
ATTAACAGCA TGTTGCATGA TGTTATTCGC CATGGCACGG GACGGCGCGC TAAAAAACTT
GGGCGAAATG ATTTAGCGGG CAAAACGGGA ACAACCAATG ATCAACATGA CGCTTGGTTT
TCTGGCTTTA ATCCAGAACT CGTTGCTGTC TGCTGGGTAG GTTTTGATCA GCCCGAATCA
TTGGGAAGTT TAGAAACAGG CGCCCGGGTA GCGCTTCCAA TGTGGATAAA CTATATGGGC
ACCGTGCTCG ATGGTACGCC AGAAAAACCT TTTATCCCAC CTAAAGGCAT GGTAACAGTA
CGTATTGATC CTGAAACCGG GTTACTCGCG GACTCTAATG CTTCTGATGC TATTTTTGAA
ACTTTTATTG CTGGACACGC CCCTACCAGA TACGATGATT CAAGTAGCGA GGGCAGCGAC
GGCAGTACAA AGACGGATAC CCCCGTTGCC GAACGGTTAT TTTAA
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| Protein sequence | MTYLLRLFRW MVLLLLTATT VGILVAVGMY FYLLPQLPST DTLKNIHLQV PLRIYSHDKK
LIAQYGEKRR IPLAFEQFPD LLVKAILAAE DDRFYEHPGV DYQGILRAAL YLVKTGKKAQ
GGSTITMQVA RNFFLSREKT YLRKFNEILL ALQIERELSK QDIIELYLNK IYLGNRAYGA
AAAAQVYYGT TLDKLELSQL AMIAGLPKAP SRYNPIANQK RALLRRNYVL RRMREVGYID
PETYQDAAAQ PATAKFHELP IELNAPFVAE MARSQMFEKY GSDIYTAGYN VYTTIKAEHQ
KAANDALRKA LLDYDRRHGF RGPERHIELP VDAGEIFYQQ ALSQRRLANG LVPALVLATD
ERTSRIYTKT DGEAMLTWEG LSWAQPYLEV NAVGEKPKQA ADILKAGDLI WVEALPKGGW
RLAQRPRVEG AIVSLSPYNG NITALSGGFD FYESKFNRAT QSQRQPGSSF KPFLYSAALN
KGYTAASIIN DAPIVLDEPG GPDNAWRPEN YSGRFYGPTR LRTALTHSRN LVSIRLLRAI
GIDYAIEYIQ NFGFKAEQLP QSLSLALGSG SASPLEMARG FAVFANGGYL IEPYLIERTE
NADGKIIFRS RPAQVCQRCE KIKTERTQAY NPTLTADLLN TESAQFNPAP RAITAQNAYL
INSMLHDVIR HGTGRRAKKL GRNDLAGKTG TTNDQHDAWF SGFNPELVAV CWVGFDQPES
LGSLETGARV ALPMWINYMG TVLDGTPEKP FIPPKGMVTV RIDPETGLLA DSNASDAIFE
TFIAGHAPTR YDDSSSEGSD GSTKTDTPVA ERLF
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