Gene Noc_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0244 
Symbol 
ID3706299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp268636 
End bp269841 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content51% 
IMG OID637736760 
Productmalate dehydrogenase 
Protein accessionYP_342304 
Protein GI77163779 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTG CCTTAGGCTA TCATGCGGAG CCGCGGCCTG GAAAATTGGA GATCAGTATT 
ACCAAGCCTT GCGCGACACA GCAGCAGTTG AGTTTAGCCT ATAGTCCTGG AGTTTCTGTA
CCGGTGGGAG CTATTGTGGC TGATCCTGAA GCTGTCTATC GTTATACCGC TAAGGGTAAT
TTGGTTGCGG TAATTACCGA TGGCAGCGCC GTATTGGGGT TGGGAAATAC AGGTCCTTTG
GCCAGCAAAC CCGTGATGGA AGGCAAGGCG GTTTTGTTTA AGTCTTTCGC CGGGCTAGAT
GCTATCGATA TCGAAGTAGA GGCGGAGTCT CCCGAGGCCT TCGTGGATAC AGTAGCCCGT
ATCTCACCGA CTTTTGGCGG AATCAATCTG GAGGATATTG CCGCACCTCA CTGTTTTATG
ATCGAGCAAG CCCTTATTGA GCGTCTGGAT ATCCCGGTTC TGCATGATGA CCAGCATGGT
ACGGCCATCA CAATTGCGGC AGCGCTTCAA AATGCCCTGG AATTGCAGGG AAAATCTTTA
CCAGAGGCCC GAATCGTTTG TGTGGGTGCT GGGGCGGCTG GGATTGCAAC GCTTCGGCTG
CTGGTTGCCC TAGGTCTGGA TCAGGAGAAC ATTTTACTCG TTGATCGCCA AGGGGTTATT
CGCGAAGAGA GCCAAGCACC GCATTCTTAT TGCCGTCCTT TTATCTCTTC CTCGCCAAAG
CGTACCCTAG AAGAAGCGAT AGAGGGGGCG GATGTCTTTA TTGGCGTGGC GGCTCCCAAT
CTGTTGACTA TGGAGATGCT AAAATCCATG GCTTCACGCC CTATTGTCTT TGCACTTTCT
AACCCGGATC CAGAGATAGA TCCAGGTTTA GCCCATGCCG CTCGTGATGA TTTAATCTTG
GCTACCGGCC GCACCGACTA TCCCAACCAG GTAAATAATG TATTAGTTTT TCCTTTCTTG
TTCCGCGCTG CCCTCAATGT TCGTGCCCGA TGCATTAATG ATGCAATGAA GCTTGCGGCA
GTGCGAGCAT TGGTTGAGCT GACAAAGGAG CCAGTTCCCA AACAAGTGCT TGAAGCTTAT
GGCGAGCAGC AACTTGCTTT CGGAGCCAAT TACATTCTTC CCAAGCCACT GGATCCCCGT
TTAAGAGAGT TTGTGACGAT GGCTATTACT CAAGCAGCCA TTGAGTCGGG GATAGCACGA
ATTTAA
 
Protein sequence
MATALGYHAE PRPGKLEISI TKPCATQQQL SLAYSPGVSV PVGAIVADPE AVYRYTAKGN 
LVAVITDGSA VLGLGNTGPL ASKPVMEGKA VLFKSFAGLD AIDIEVEAES PEAFVDTVAR
ISPTFGGINL EDIAAPHCFM IEQALIERLD IPVLHDDQHG TAITIAAALQ NALELQGKSL
PEARIVCVGA GAAGIATLRL LVALGLDQEN ILLVDRQGVI REESQAPHSY CRPFISSSPK
RTLEEAIEGA DVFIGVAAPN LLTMEMLKSM ASRPIVFALS NPDPEIDPGL AHAARDDLIL
ATGRTDYPNQ VNNVLVFPFL FRAALNVRAR CINDAMKLAA VRALVELTKE PVPKQVLEAY
GEQQLAFGAN YILPKPLDPR LREFVTMAIT QAAIESGIAR I