Gene Noc_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0239 
Symbol 
ID3706294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp263605 
End bp264066 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content50% 
IMG OID637736755 
Producthypothetical protein 
Protein accessionYP_342299 
Protein GI77163774 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTA CTGTCCATAT TCAATATGCC GTGCCCAAGG CAAGCGTGCC GCTGCAAGCC 
GATTTCCTGC GTTGGGTGAA GGCAGCGCTG GTAAATCAGT CGAAAGCGGG GGAAATCACT
ATCCGTGTCG CCAGTGAAAG TGAGGCGGCG CAGCTTAACT GGCGGTATCG CCACAAGGAA
GGAGCAACCA ACATCCTGTC TTTTCCTTTT GAGGTTCCCT CCTGCGTGTC TCTTGATGTT
CCCTTGTTAG GAGACTTGGT TATTTGTGCT CCGGTGGTTG CGCGTGAAGC CTTGGAACAA
ACTAAGAAAG AGCAGGCCCA CTGGGCTCAC CTAGTGGTTC ATGGAGTGCT TCATTTACTA
GGTTTTGATC ACCAACAGGA AGTGGAAGCG CAGCAAATGG AGAGCCTGGA AGTGACTATA
CTTGAATCAT TAGGTTATCC CGATCCCTAC GAGAGTGTAT AA
 
Protein sequence
MSITVHIQYA VPKASVPLQA DFLRWVKAAL VNQSKAGEIT IRVASESEAA QLNWRYRHKE 
GATNILSFPF EVPSCVSLDV PLLGDLVICA PVVAREALEQ TKKEQAHWAH LVVHGVLHLL
GFDHQQEVEA QQMESLEVTI LESLGYPDPY ESV