Gene Noc_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0236 
SymbolradC 
ID3706291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp260116 
End bp260790 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content56% 
IMG OID637736752 
ProductDNA repair protein RadC 
Protein accessionYP_342296 
Protein GI77163771 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA CCGACTGGCC CGTCCACGAA AGGCCCCGCG AGAAACTTCT TCAACGAGGT 
CCAAATGCCT TATCGGATGC CGAACTTTTA GCTATTTTTC TCCGTACCGG AGTCGCCGGA 
AAAACCGCTG TTGACTTGGC ACGGGAACTC CTGGAAAGCT TTGGTAGCCT CCGAGCATTG 
CTTGAGGCTG ATCTTAAACA ATTCTGCCAT GCTCCAGGGC TGGGAATAGC TAAGTATACG 
CAACTGCAAG CCTGCCTGGA AATGGGGCGC CGCCACCTGG AAGACACCCT CAAGCGTGGC 
GATGTTCTAA CTGATCCCCA AACCACTCAA CGCTACCTGG TGGCGCGCTT GCGGGCTTAT 
CCCTTTGAAG TCTTCTCTTG CCTTTTCCTT GACAACCGGC ACCGAGTGCT AGCCTTCGAA 
GAGCTTTTCC GGGGCACCAT TGATGGCGCC AGTGTGCATC CCCGCGAAGT GCTCAAGCGC 
GCCCTTGCCC ATAACGCTGC GGCCGTCATC CTGGCCCACA ATCACCCCTC CGGGGTGGCC 
GAACCCAGCC GAGCCGATGA GTGCATCACG CAGCGCCTTA AGGAAGCGTT AGCGCTGGTA 
GATATTCGAG TGCTCGATCA CATTATTGTA GGAGATGGCG AAACCCTATC CTTTGCCGAG 
CGGGGTCTCC TCTAA
 
Protein sequence
MAITDWPVHE RPREKLLQRG PNALSDAELL AIFLRTGVAG KTAVDLAREL LESFGSLRAL 
LEADLKQFCH APGLGIAKYT QLQACLEMGR RHLEDTLKRG DVLTDPQTTQ RYLVARLRAY 
PFEVFSCLFL DNRHRVLAFE ELFRGTIDGA SVHPREVLKR ALAHNAAAVI LAHNHPSGVA 
EPSRADECIT QRLKEALALV DIRVLDHIIV GDGETLSFAE RGLL