Gene Noc_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0234 
Symbol 
ID3706289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp258764 
End bp259558 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID637736750 
Productthymidylate synthase 
Protein accessionYP_342294 
Protein GI77163769 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT ATCTGGAACT TATCCAAAAG ATACTCGATA CCGGAGTCGA GCGGGATGAT 
CGGACTGGCA CCGGAACGTG GTCTATCTTC GGGCATCAGA TGCGATTTGA TCTTCGGCAG
GGTTTTCCGC TGATTACAAC TAAAAAGCTT CATATTCGCG CAATCTTTAT TGAGCTGTTA
TGGTTCCTCC GGGGTGAGAC TAATGTTAAA TATCTCCATG ATCATGGGGT GACGATTTGG
GACGAATGGG CCGATGAGCA GGGGGAGCTG GGTCCCATCT ACGGTTATCA ATGGCGCTCA
TGGCCTCTGC CCGATGGGGG ATATTTAGAT CAGATGGCGA AAACGTTAAC GCAGATACGG
AATCATCCCC ACAGTCGGCG CCATGTGGTG GTGGCCTATA ATCCGGCTTG CGTGGATGAA
ATGGCTCTCC CTCCCTGCCA TGCGCTATTC CAATTCTATG TGGCCCAGGG CCGTTTGTCT
TGCCAACTCT ATCAGCGCAG CGCCGATGTT TTTCTTGGGG TTCCCTTCAA TATCGCGTCC
TATGCGCTTT TGACCCACTT GATAGCCCAG CAATGCGATT TGGATGTGGG GGAATTCGTT
TGGACAGGAG GGGATGTCCA CCTGTACCGG AATCATCTAG AACCGGCGCG GCTGCAATTA
ACCCGGGAGC CGCTTTCGCT TCCCCATCTC CGAATCAAGC GCCGACCTCC TTCTTTGTTT
GAATACCAAT ACGATGATCT GGAGATTGTA GACTATCAAA GCTATCCTGC CATAAAGGCG
GCTATTTCAG TATGA
 
Protein sequence
MKPYLELIQK ILDTGVERDD RTGTGTWSIF GHQMRFDLRQ GFPLITTKKL HIRAIFIELL 
WFLRGETNVK YLHDHGVTIW DEWADEQGEL GPIYGYQWRS WPLPDGGYLD QMAKTLTQIR
NHPHSRRHVV VAYNPACVDE MALPPCHALF QFYVAQGRLS CQLYQRSADV FLGVPFNIAS
YALLTHLIAQ QCDLDVGEFV WTGGDVHLYR NHLEPARLQL TREPLSLPHL RIKRRPPSLF
EYQYDDLEIV DYQSYPAIKA AISV