Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0234 |
Symbol | |
ID | 3706289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 258764 |
End bp | 259558 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637736750 |
Product | thymidylate synthase |
Protein accession | YP_342294 |
Protein GI | 77163769 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0207] Thymidylate synthase |
TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGT ATCTGGAACT TATCCAAAAG ATACTCGATA CCGGAGTCGA GCGGGATGAT CGGACTGGCA CCGGAACGTG GTCTATCTTC GGGCATCAGA TGCGATTTGA TCTTCGGCAG GGTTTTCCGC TGATTACAAC TAAAAAGCTT CATATTCGCG CAATCTTTAT TGAGCTGTTA TGGTTCCTCC GGGGTGAGAC TAATGTTAAA TATCTCCATG ATCATGGGGT GACGATTTGG GACGAATGGG CCGATGAGCA GGGGGAGCTG GGTCCCATCT ACGGTTATCA ATGGCGCTCA TGGCCTCTGC CCGATGGGGG ATATTTAGAT CAGATGGCGA AAACGTTAAC GCAGATACGG AATCATCCCC ACAGTCGGCG CCATGTGGTG GTGGCCTATA ATCCGGCTTG CGTGGATGAA ATGGCTCTCC CTCCCTGCCA TGCGCTATTC CAATTCTATG TGGCCCAGGG CCGTTTGTCT TGCCAACTCT ATCAGCGCAG CGCCGATGTT TTTCTTGGGG TTCCCTTCAA TATCGCGTCC TATGCGCTTT TGACCCACTT GATAGCCCAG CAATGCGATT TGGATGTGGG GGAATTCGTT TGGACAGGAG GGGATGTCCA CCTGTACCGG AATCATCTAG AACCGGCGCG GCTGCAATTA ACCCGGGAGC CGCTTTCGCT TCCCCATCTC CGAATCAAGC GCCGACCTCC TTCTTTGTTT GAATACCAAT ACGATGATCT GGAGATTGTA GACTATCAAA GCTATCCTGC CATAAAGGCG GCTATTTCAG TATGA
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Protein sequence | MKPYLELIQK ILDTGVERDD RTGTGTWSIF GHQMRFDLRQ GFPLITTKKL HIRAIFIELL WFLRGETNVK YLHDHGVTIW DEWADEQGEL GPIYGYQWRS WPLPDGGYLD QMAKTLTQIR NHPHSRRHVV VAYNPACVDE MALPPCHALF QFYVAQGRLS CQLYQRSADV FLGVPFNIAS YALLTHLIAQ QCDLDVGEFV WTGGDVHLYR NHLEPARLQL TREPLSLPHL RIKRRPPSLF EYQYDDLEIV DYQSYPAIKA AISV
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