Gene Noc_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0228 
Symbol 
ID3706283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp252777 
End bp253196 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID637736744 
Producthypothetical protein 
Protein accessionYP_342288 
Protein GI77163763 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGGA TCAAAGCCTT TCATATTATC TTTGTGGTGA CCTGGTTCGC TGGTCTGTTT 
TATTTACCGC GGTTATTTGT CTACCATGCC CAATGCCAGG ATAAGCCAGG GCGGGAGCGT
TTTAAAGTCA TGGAGCGCAA GCTTTATCGC GGTATTATGC ATCCTAGTGC TATTTTGGCA
GTGGGATTAG GTGTGTGGCT GATTTATTTA ACTCCGGCTT GGATGGGGGC GGGGTGGCTC
CATGTCAAAC TTTCCCTGGT TCTGCTTTTG ATTGCCTATC ATCTTTATTG TGGCCGGTTG
TTGATCGCCT TTCGCGAAGA GCGTAACCGC CACAGTCATG TGTATTATCG CTGGTTTAAT
GAGTTCCCAG TGTTAATCCT GATTGGCGCG GTGATTCTAG TGGTGGTAAA GCCTTTTTGA
 
Protein sequence
MLWIKAFHII FVVTWFAGLF YLPRLFVYHA QCQDKPGRER FKVMERKLYR GIMHPSAILA 
VGLGVWLIYL TPAWMGAGWL HVKLSLVLLL IAYHLYCGRL LIAFREERNR HSHVYYRWFN
EFPVLILIGA VILVVVKPF