| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0227 |
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| Symbol | |
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| ID | 3706282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 251159 |
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| End bp | 252547 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637736743 |
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| Product | PAS /MASE1 sensor domain-containing protein |
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| Protein accession | YP_342287 |
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| Protein GI | 77163762 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3447] Predicted integral membrane sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGGTA AACCCGTAAC AAGAGCGCAG GGAATCCGTT TTCTGGCGGT CGGTCTAGCT
TATTTTCTGA CTGCCTTGCT CAAAACTGAG CTATCTAACG AAGGCGACAA TATCGCCGTG
CTGTGGCCAT CGAACGCCAT CCTCATCGGC GTACTATTGC GGGCCAACCC TCGCTACTGG
CCGGGTTACT TCGGGAGCTG CCTGCTAGCC GACCTAGTGG CCAGCAAGCT GATGGGTGAG
TCAACCAGTA TCGCGCTAGG GTTTATGCTG GCCAATGGCT TGGCGGTTGC CGTAACGGTC
GCTTGCATGC AGCGGCTAAT GCCACTACCG GTTACACTCC GGGAACCCTC GCAACTACTA
GCGTTAGTAG GTGCGGGTCT GCTTGGCACC GCCGCGGGCG CAGTCTTCAT TGGGGTGGTC
TATGGCACAT TTTACTGGGC CGCGTGGCCG ACTTGGTGGC TCGCCGATGT GGTCAGTATC
GCCCTCATCA CACCGGTCCT GCTAAGCGCT TCCTGGCCAG TGGCGAAAAT GTTGCTGACG
AAGCGGGCGA TTGAAACGGC AATGGCCTTA CTGAGCGCCG CGGCGGTTAC AGTCGGCGTG
TTCCACAGTT CATCGTACGC CCTCATATAC TTAACTGCCC CCGTGATGCT CTGGTTCAGT
TTCCGTCTCG GCCTATTTGC GTGTGGGGTA CTGGGACTCG TTATCACTAT CATCGTGGTT
GCACTCACGC TGCAAGGCGT GGGTCCCATC GCCAGTCAAG CCGGCGGCAT TTCCTTAACC
ACGATTCAAA CGCTGCAAAT TTACCTAAGT CTAGTCATCC TGCCAGCGCT GGTGATTAGC
ATCGAGCGTG AAAACCGGCT TCGTGCAGAA GCGGAGATAA TACAAAATCA AGCACGCTAT
CGCTCGCTCT ATCATGATAC CCCGGCCATG CTGCACTCGA TTGATCATCA AGGGCGGCTG
CTCAGGGTCA GCGCTTATTG GCTCACCATC ATGGGCTATG AGCACGATGA GGTCATTGGG
CGGTGCTCTA CGGATTTTAT GACCGAGGCC TCCCGCCGCT ACGCGACCGA GGTTGTACTA
CCGGCATTTA TGCGTAGCGG CGCTTGCCGC GACGTCCCTT ACCAAATGGT AAAGAAAAAC
GGCGAAGTTT TTGATGTCCT GCTATCGGCC ATTGCCGAGC GCGACCCTGA CGGCAGTGTG
GCTCACTCGC TCACAGTAAT GCATGATGTC ACCGCCCGTA ACCGTGCCGA GGCCGCGCTG
GTCGCCGAAA AAGAGCGTAT CCAGGTAACC CTGGAATCCA AAAGAAAAAC GGCGAAGTTT
TTGATGTCCT GCTATCGGCC ATTGCCGAGC GCGACCCTGA CGGCAGTGTG GCTCACTCGC
TCACAGTAA
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| Protein sequence | MGGKPVTRAQ GIRFLAVGLA YFLTALLKTE LSNEGDNIAV LWPSNAILIG VLLRANPRYW
PGYFGSCLLA DLVASKLMGE STSIALGFML ANGLAVAVTV ACMQRLMPLP VTLREPSQLL
ALVGAGLLGT AAGAVFIGVV YGTFYWAAWP TWWLADVVSI ALITPVLLSA SWPVAKMLLT
KRAIETAMAL LSAAAVTVGV FHSSSYALIY LTAPVMLWFS FRLGLFACGV LGLVITIIVV
ALTLQGVGPI ASQAGGISLT TIQTLQIYLS LVILPALVIS IERENRLRAE AEIIQNQARY
RSLYHDTPAM LHSIDHQGRL LRVSAYWLTI MGYEHDEVIG RCSTDFMTEA SRRYATEVVL
PAFMRSGACR DVPYQMVKKN GEVFDVLLSA IAERDPDGSV AHSLTVMHDV TARNRAEAAL
VAEKERIQVT LESKRKTAKF LMSCYRPLPS ATLTAVWLTR SQ
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