| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0226 |
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| Symbol | |
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| ID | 3706281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 249384 |
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| End bp | 251159 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736742 |
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| Product | PAS sensor diguanylate cyclase and phophodiesterase |
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| Protein accession | YP_342286 |
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| Protein GI | 77163761 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGATG TCACCGCCCG TAACCGTGCC GAGGCCGCGC TGGTCGCCGA AAAAGAGCGT
ATCCAGGTAA CCCTGGAATC CATCGGCGAC GGGGTGATTA CTACTGATGC TAATAGCCGT
ATCAACTACC TTAATCCAAC CGCCGAGGCT ATGACCGGTT GGCTATTGGC GGCTGCCCGG
GGCAAAGCAT TACCGGACGT ATTGCAAATT ATCAATGAGT CCACCCGTGA GCCGGTAGCC
GATCCTCTCG CCCCTTGCTT GACTGGCAGC TCCGCTGTGA GATCCACCAA CCCTACGGTA
CTCATCAGTC GCCACGGCGC CGAATATTCA ATTGAAATCT CCGCCGCCCC TATCCGCGAC
GCCAACAACC AGGTGCTAGG CGCGGTACTG GTATTTCACG ATGTTAGTGA ACAGCGCCGG
TTGCAGTGCG AAATTGCCCA TCAGGCGCAA CACGATGCCC TTACGGGTCT AGTCAATCGC
CGTGAGTTTG AGCGGCGCTT GCAAAGGGTA ATCGAGACCG TTCAGACGCA AAACAGCGAG
CACGCCCTAT GCTATCTCGA TCTCGATCAA TTTAAGCTTG TCAACGACAC TTGCGGGCAC
GCTTCAGGCG ATGCGTTGTT GCAACAGCTG GCGGTGCTGT TCGAAAAAAA TATCCGTCGG
CGCGATACGC TGGCGCGGCT GGGAGGCGAT GAATTTGGGC TGCTATTAGA GCACTGCTCG
TTGGACAGAG CGCTGCAAAT AGCCAATACC TTACGTCAAA CGGTTGAGGG TTTCCGTTTT
TGCTGGAATG GGCAACACTT TCGGATCGGC GTCAGTATCG GCTTGGTGCC CATCACCATT
GCTAATTCAA GCGCCGCCAG CGTCTTACAA ACAGCCGACA GCGCCTGTTA CGTTGCTAAA
GACGGCGGCC GTAATCGAAT TCACATTTAT CGTGAGCACG ATGTGGAGTT GGCCCGGCGC
CATGGTGAAA TGCAATGGGT GGCCCGTATT CAGCAGGCAT TGGAAGAGAA TCGCTTTCAA
CTGTATGCAC AACCGATAGT GCCGCTTAAG GCCACGCTAT CCGGTGGCAT ACACTGCGAA
TTGTTACTAC GGTTGGTGGA AAACGATGGT AAGATATCGC CGCCAGGCGC ATTTATGCCA
GCCGCCGAGC GCTATAATCT GGCCGTTGCG ATTGATCGCT GGGTCGTTAC CCAGGCATTG
CGCTGGCTGG CCGCCCATCC GGCGCTGCTT GATCGAATCA CGTTATGCAC TATTAATTTA
TCGGGCCACT CTATCGGTGA TCGCTTTTTC CACGCTTATG TACTGCGGCA ATTTGACGAT
ACCGGCCTGC CGGCTAAAAA AATCTGCTTC GAGATTACGG AAACAGCCGC CGTGGCTAAT
CTTGCTGATG CCACCCGGTT CATGGAGGCG CTGAAAACAC GCGGCTGTTG TTTCTCTCTT
GATGACTTTG GCAGCGGCTT GTCCTCGTTT GCTTACCTCA AGGCCCTGCC CGTTAATTTT
CTCAAAATTG ATGGTCTATT TGTTAAAGAC ATTGTCGATG ACCCCATCGA TCTGGCTATG
GTTCGTTCAA TCAACGAAAT CGGCCATCTG CTGGGGAAAA AAACCATTGC TGAATACATC
GAAAACGACG CTATCCTGGA TAAACTACGC GGCCTCGGTA TAGATTACGG GCAAGGCTAT
GGCCTTGGTC AGCCGCAACC GTTGTCCGCG CTACTTGCAA CAGTGTCTAG GCCCGCTAAT
TCCATAAAAA CGGGAGCGGA TACCCATTTC ATATAA
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| Protein sequence | MHDVTARNRA EAALVAEKER IQVTLESIGD GVITTDANSR INYLNPTAEA MTGWLLAAAR
GKALPDVLQI INESTREPVA DPLAPCLTGS SAVRSTNPTV LISRHGAEYS IEISAAPIRD
ANNQVLGAVL VFHDVSEQRR LQCEIAHQAQ HDALTGLVNR REFERRLQRV IETVQTQNSE
HALCYLDLDQ FKLVNDTCGH ASGDALLQQL AVLFEKNIRR RDTLARLGGD EFGLLLEHCS
LDRALQIANT LRQTVEGFRF CWNGQHFRIG VSIGLVPITI ANSSAASVLQ TADSACYVAK
DGGRNRIHIY REHDVELARR HGEMQWVARI QQALEENRFQ LYAQPIVPLK ATLSGGIHCE
LLLRLVENDG KISPPGAFMP AAERYNLAVA IDRWVVTQAL RWLAAHPALL DRITLCTINL
SGHSIGDRFF HAYVLRQFDD TGLPAKKICF EITETAAVAN LADATRFMEA LKTRGCCFSL
DDFGSGLSSF AYLKALPVNF LKIDGLFVKD IVDDPIDLAM VRSINEIGHL LGKKTIAEYI
ENDAILDKLR GLGIDYGQGY GLGQPQPLSA LLATVSRPAN SIKTGADTHF I
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