Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0217 |
Symbol | |
ID | 3706272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 240162 |
End bp | 240821 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637736733 |
Product | deoxyribonuclease V |
Protein accession | YP_342277 |
Protein GI | 77163752 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.438952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACCC ATTCTTGGAA TTTATCGCCT AAGGAGGCCG TGGCATTGCA GCGGCGGCTT GCCGATCAAG TAGTTGCTGA AGATCGCTTG GGGCAAGTTC ATTTTGTTGC CGGGGTCGAT GTGGGATTTG AAGAGCAGGG TAAGATCACC CGGGCTGCGG TAGTGGTTCT CCGGCTTGCC GATCTGAGTC TGGTCGAGCA GGTCGTTGCC CGGCGGCCCA CCCACTTTCC CTATATTCCC GGACTATTGT CATTCCGCGA GTGTCCCACA GTGTTGGCGG CGCTGGAGAA ATTAACCGTA ACGCCAAATC TGCTGCTCTG CGATGGTCAG GGAATCGCTC ATCCGCGCCG TTTTGGGATC GCTTGCCATC TAGGGGTGCT CACCGGCTTG CCGAGTATTG GCGTGGCTAA AACTCGTTTG GTCGGCAAAC ATGGGCCGGC ACCGGATAAG CGCGGTGGCT GGACGCCCCT GACCGATAAG GGTGAGACGA TAGGTGTCGT ATTGCGCACG CGCATCAAAG TCAACCCTGT CTTTGTCTCG ACAGGCCACC GGATTAGCCT GCTTACCGCC ATCCAGTATG TAATGGCGTG TACTACGCGT TATCGGCTTC CAGAGACGAC GCGCCTTGCC GATAAGCTTG CCAGCGGCTC CAAAAAATGA
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Protein sequence | MKTHSWNLSP KEAVALQRRL ADQVVAEDRL GQVHFVAGVD VGFEEQGKIT RAAVVVLRLA DLSLVEQVVA RRPTHFPYIP GLLSFRECPT VLAALEKLTV TPNLLLCDGQ GIAHPRRFGI ACHLGVLTGL PSIGVAKTRL VGKHGPAPDK RGGWTPLTDK GETIGVVLRT RIKVNPVFVS TGHRISLLTA IQYVMACTTR YRLPETTRLA DKLASGSKK
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