Gene Noc_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0207 
Symbol 
ID3706242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp228655 
End bp230709 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content50% 
IMG OID637736723 
Productprotein phosphatase 2C-like, stage II sporulation E 
Protein accessionYP_342267 
Protein GI77163742 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.543577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGC GAGAAATTGA TCCTGCCCGT GCCGAATTGG AGTTAGAGCG CGAGTTGACT 
AAAGAAAAAT CTGTCGAACA ATCATTACCC CAGCAGATCG TTAGTCTGAA AGAACGCTTA
TTCCAACAGG CAGTTGAGTT GAAGAAGGTC AAGGCAACTC TTAAAGAAAG CGAAGAACGC
TTTAACCAGG TTGCCGCCAT GACGGGGGAG TGGATCTGGG AGCAGGATGA TAAGGGCCAC
TATACTTATA GCAGTATCAG TGTGGATGCT GTTCTAGGTT ATCCTTGGCA GGCGCTGATC
GGACGCTGTT ACGATGAATT TATCCCCATC GAGGAGCAGG AGAAACTACG CTCAAAAATG
CGCCAAGGTG TTGAGACAGG ACAAGGTTTT CAGCATTTAA TTCGCCGCTA CCGACATCGG
GATGGCCATC TTGTTTTTAC CGAATCAACG GCAATGCCTG TCTTTGATGA GCAAAATAGT
TTGCTCAAAT GGCGTGGCAT TGATCGGGAT ATCACTGCCA CCCGGCGGGC CGATGAGCTG
GTATTCATGC TCTCCCGGGC GTTGGAACAA AGCCCCAATG CCATCCTGAT TACTGATCTT
AAGGGTAATA TCGAATACGT AAATACCTCT TTTACGCGAT TAACGGGTTA CGAGGCCAAG
GAAGTAATCG GTAAAAATCC GAGCCTGCTA CAGTCCGGGA AAACCCCTCT TGAGCAATAC
CGGCGATTAT GGGAAACCAT TCGCGCGGGT CGTGAATGGC GGGATGAAAT TCAGGATCGG
AAAAAAAGTG GCGAACTCTA TTGGGCCTTG GAGACAATTA CGGCACTTCG TGACGGAGAG
GGCAACCCTA CCCATTTTTT GGCGATTCAG GAAGACATTA CCGAGCGGAA GCGGGTTGAG
GCGGCCTTGC GGGAGAGTGA GGCCCAAACC AGGTTAATCA TCGAGAATGC CTTGGATGCC
ATTGTTCTGA TCAGTGCCAA CGATTCAATC ACCGATTGGA ATCCTCAGGC TGAAAAAATT
TTTGGCTGGA AGCGCGAGGA AGTATTGGGA TTGTCATTAG CGGAAACCAT CATTCCTCCC
CGCCACCGGG AAGCCCACTG GCAGGGGTTG CGGCGATTTT TAAACACAGG CAAGGGGCCC
ATTTTGGGTA AGCGGGTTGA ATTGAGCGCC TTGCATCGAG ATGGGCATGA GTTTCCGGTT
GAGTTGACTG TGCTGCCTCT AAAAGTAAGG AATAGCTATG TATTCAGTGG CTTCCTGCGC
GATCTTACCC AGCAAAAAGA AACGGAAGAA GCCATTCGGC AAGCGCGCGT GAAGTTGGCA
GTAGCCCAAA ATGAAATGCG GATCGCCCAA CAGATCCAAG AATCATTATT TCCTCCCGCC
CCGCTGGTGC TGCCGACGGT AAAAATTATG GGCTACTGTC TCCCTGCCAC CCATGTGGGT
GGGGATTATT TTGACTACTT TCAGTGGCGG GATAAAACCA TTGACATTGT GATTGCCGAT
GTCTCGGGGC ATTCTGTAGG GCCGGCGTTA TTGATGGCTG AGGCGCGGAG TGCATTAAAG
TCGCAATTTC ATTTACATAG AACGGTGGTG GAGACGCTAT CTAGTCTCAA TGAGACGCTC
TACGAAGATT TGGACCGGGC CGATCTCTTC ATCACCCTCT GTTATTTGCG TTACGATATG
GTGACGCGCC AATTAACCTA TGCTAATGCT GGCCACCTTC CGCCGTTGTT ATTTCGTCAA
GGGCAGCGCT GCAGGCAACT GGATGCGGAT GGGCTGGTGC TCGGCGTGAA TAGAGAGGTG
ATTTTCGAAA CGCGTTCTGA GAGCTTGCAG CCGGGGGATA TGCTTTTTCT CTACACCGAT
GGCATCATTG AAGCCGAGAA TAAAAAAGGC GATTTTTTTG GAATTGAGCG CCTCTGTGAT
TTGCTTAATG AGCACCATCA AGCGGGATCG GAGCCTCAGG AGATTATCAC GAACATCATT
GAACGGCTGC AAGCTTTTCG TCATAGAAAA ACCTTTGAGG ACGATGTCAC CATGGTGGTG
GTGAAAGTAT TGTAA
 
Protein sequence
MNKREIDPAR AELELERELT KEKSVEQSLP QQIVSLKERL FQQAVELKKV KATLKESEER 
FNQVAAMTGE WIWEQDDKGH YTYSSISVDA VLGYPWQALI GRCYDEFIPI EEQEKLRSKM
RQGVETGQGF QHLIRRYRHR DGHLVFTEST AMPVFDEQNS LLKWRGIDRD ITATRRADEL
VFMLSRALEQ SPNAILITDL KGNIEYVNTS FTRLTGYEAK EVIGKNPSLL QSGKTPLEQY
RRLWETIRAG REWRDEIQDR KKSGELYWAL ETITALRDGE GNPTHFLAIQ EDITERKRVE
AALRESEAQT RLIIENALDA IVLISANDSI TDWNPQAEKI FGWKREEVLG LSLAETIIPP
RHREAHWQGL RRFLNTGKGP ILGKRVELSA LHRDGHEFPV ELTVLPLKVR NSYVFSGFLR
DLTQQKETEE AIRQARVKLA VAQNEMRIAQ QIQESLFPPA PLVLPTVKIM GYCLPATHVG
GDYFDYFQWR DKTIDIVIAD VSGHSVGPAL LMAEARSALK SQFHLHRTVV ETLSSLNETL
YEDLDRADLF ITLCYLRYDM VTRQLTYANA GHLPPLLFRQ GQRCRQLDAD GLVLGVNREV
IFETRSESLQ PGDMLFLYTD GIIEAENKKG DFFGIERLCD LLNEHHQAGS EPQEIITNII
ERLQAFRHRK TFEDDVTMVV VKVL