Gene Noc_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0203 
Symbol 
ID3706238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp223337 
End bp223744 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content52% 
IMG OID637736719 
ProductCu(I)-responsive transcriptional regulator 
Protein accessionYP_342263 
Protein GI77163738 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGCA TTAGTGAGGC CGCGACCCAA TCTGGGTTAC CGGCCAAAAC TATCCGTTAT 
TATGAAAGCA TTGGCCTAGT TTATCCTCCG CAACGAGGGA GCAATGGTTA TCGGCGTTAC
GATCAAGGAA CCGTTCGGAT CCTCCAGTTT ATCAGGCGGG CTCGCGGTCT CGGCTTCAGC
GTTGAGGAAT GCCGTAATTT GCTGTCGCTG TATCAAGATA AAAACCGGGC TAGTGCCGAA
GTTAAACGTC TCACCAAGCA ACGGGTGGTT GACATCAATA ACAAAATTGC CGAGCTTACT
GCCATGCGGA CCACGCTTAC TCAACTCATC GACCGCTGCC AAGGCGGCCA ACGGCCTGAT
TGCCCCATTC TGGAGGATCT AGCGCAGTCC AATCTCCCTC CTCCCTAA
 
Protein sequence
MMSISEAATQ SGLPAKTIRY YESIGLVYPP QRGSNGYRRY DQGTVRILQF IRRARGLGFS 
VEECRNLLSL YQDKNRASAE VKRLTKQRVV DINNKIAELT AMRTTLTQLI DRCQGGQRPD
CPILEDLAQS NLPPP