Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0201 |
Symbol | |
ID | 3706236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 218757 |
End bp | 221843 |
Gene Length | 3087 bp |
Protein Length | 1028 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637736718 |
Product | acriflavin resistance protein |
Protein accession | YP_342262 |
Protein GI | 77163737 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CCGATCTCTT TGTTCGTCGC CCGGTGCTGG CCAGCGTGGT GAGCTTGCTA ATTCTACTGA TTGGGATGCG CTCTTTAACT CTACTGGAGG TGCGGCAGTA TCCTGAGACC GAGAATACAG TGGTGACGGT GTCTACCGCT TATCCGGGGG CCAGCAGTGA ATTGATTAAC GGCTTTATTA CCACCCCCTT GCAACAGGCA ATTGCCGAGG CGGAAGGCAT AGATTATCTA GTAGCGACTA GCACCCAGGG CCACTCGATC ATCGAAGCCC ACATGGTGTT GAACTATGAT TCCAATGCCG CAGTTGCCGA AATTCAAGCT AAGGTCGCCA GTCAGCGCAA CGTACTGCCC GAAGAAGCCG AGAACCCGGT CATCGACTCT ACCACGGGCG ATTCTACTGC ATTGATGTAC ATGGCCTTCT ATAGCGAGGC GATGTCACCG GCCCAAATCA CGGACTATCT GCTGCGGGTG GTACGGCCCA AGCTCCAGGC CGTGCCGGGT GTATCCAAGG CGCAGCTTAT TGGTAATAAA ACCTTTGCCA TGCGTATCTG GCTCGATCCG CGCAGGATGG CGGCCTTGGG GGTGACAGCT AACGATGTGA GAGAAGTCCT GCTGGAAAAT AATTATCTTG CCAGCGTGGG GCACACCAAA GGGGCCTACG TCGCTGTTGA TCTTAGTGCG ACTACGGATA TTAGCCGGGA GGAAGATTTC CTAAATCTGG TGGTGCGGGA AGCCGATGGC GCCCTGGTAC GTCTGCGGGA TGTCGCCGAA CCCCAACTCG GCGCCGAAGA CTACGATTCC AGTAATTGGT ATAACGGAAA GCCGGCCATC TTTATTGGCA TTGAGCAGGC GCCAGGCGCC AATCCGCTAG ATATTGCCGG GCACCTCCAT GATCTGATGC CGGAGATACG CCGCCAACTC CCCTCCGGAG TGGACGGTTA TATTGTCTAT GATGCCAGCG CCTATATCGA GGATGCGATC CGGGAGGTAT TCCGCACCCT CGCGGAAGCG GTGCTGGTTG TGCTTGTAGT GATTTTTCTG TTTCTTGGCT CCCTGCGAGC GGCGCTAGTA CCTGCTATTG CCGTTCCTCT ATCCTTGATT GGTGGGGCTT TTTTGATGCT GGTTTTAGGA TTCTCCTTGA ACTTACTCAC CTTGCTGGCC ATGGTATTGG CCATTGGGTT GGTGGTCGAT GACGCCATCA TCGTGGTGGA AAATATCCAC CGGCATCTGG AGCATGGGGA GTCCCGTTTT CAGGCTGCAA TCCACGGCGC TAGGGAATTG GGACTGCCTA TTATTGCCAT GACGACGACC CTGGTAGCCG TTTATGCGCC CATTGGTTTT ATGGGCGGTC TGGTGGGAAC CCTTTTCACT GAATTTGCTT TCACGCTAGC GAGCGCAGTG TTGGTATCGG GGGTGGTAGC GCTCACCCTC TCTCCCATGC TTTCTTCTAA GATGTTAAGA CCAGTGAGCG AAGCAGGCCG CTTTGAGCAG TGGGTGGAAC GCTTCTTTAC CCGCCTTGCT GGATACTATC TGCGCCTCTT GCGTTACGCG CTGGAGAGTC TACCCGTTGT CATTGTCTTT GCGGGAGCCA TACTGTGTAG TATTTATTTT ATGTATGTAA CCAGCCAAAA TGAATTAGCG CCCACCGAAG ATCAAAGTAT TTTGTTTTTT CAGGCCACTG CACCCCAGAC TGCCACTATT GATTACGATG AGGCCTATTC CCGCCAAATT ATCGATATCT TCGAGTCCTT CCCGGAATAT CATGAGAGTT TTCTGCTGCT TGGCCAAGGC GGCGATCCCA GTACTGTTTT TGGTGGTTTC AAGATGCCCG TGCCTTCCCA GAGGGAGCGC TCCCAGATGG AGATCCAGCC TGAGATGCAG CAAAAGTTGC AAGGGATTGC AGGATTTCAA ATCGCGGTTT TCCCCCGACC TAGTTTGCCT GGCTCCGGCG GTGGTCTGCC GCTTCAATTC GTGATCACCT CGGCTGCGGA TTTTTCCCGT TTGGATCAGA TTGCCGAAGA GCTGATTAGA CAATCCATGG CAAGCGGCAA GTTTGCTTTT CTGCAAAAAT CCGTCAAATT TTCTCGCCCT AAGACTACCC TTAAAATTAA CCGGGATCTG GCGGGGGATC TTGGCATCCG TATGAAAGAC ATTGGGCAGA ATTTGGGGAT CATGCTAGGG GGCGGCTATA TCAACTGGTT CAACTTAGAA GGACGCAGCT ATAAGGTGAT TCCGCAAGTG GACCGCCGTT ATCGTCTCGA TCAGGAAATG CTGGAAAATT ACTATATTCG CACTGGTGCG GGCGAGCTCA TTCCCCTGGC GACGCTGATT TCCTTTGAGG AAACAGTGGA GCCGAGCAAG CGAGTCCAGT TTCAACAGCT TAATTCATTG ACCGTTCAGG GCGTGATGGC TCCGGGGGTA GCGGTGGGCG AGGCGTTGGC TTACCTGGAG GATAAGGCCC GGGAGATTTT TCCTTCCGCT TTTAGCTGGG ATTACGCGGG GGAGTCCCGC CAGTATACCC AGCAGGGCAG TGCCTTGATG GTGACTTTCT TTTTCTCCCT GCTGGTGATC TACCTTGTTT TGGCAGCACA ATTTGAGAGC TGGCGTGACC CGGTTATTAT TTTGATGTCT GTTCCTATGT CTATTGCTGG GGCACTGGTG TTTCTTACCT TGGGTTTTGC GACTGTCAAT ATCTATACCC AAGTGGGGCT GATCACGCTG ATTGGTCTAA TTGCTAAAAA CGGCATCCTC ATCGTGGAGT TCGCTAATCA ACTGCAATTG CAGGAGGGGC TTGATAAACA AGCGGCGGTA GAGAAGGCCT CCAGCATCCG GTTACGCCCC ATTCTAATGA CAACGGTTTC CATGATAGTG GCGATGGTTC CCCTGCTAAT GGCAAGCGGT CCTGGCGCGG TGAGTCGTTT CGATATCGGG TTGGTGGTGG CCAGCGGTTT GGGGATTGGG ACTTTGTTTA CCCTGTTCGT GGTTCCGGCG GTGTATTTGC TAGTGGCCGG TGACCATAGG GAAGAAAAGG AGGCAGTCCA AGAGCCCATG GAACAGGAGT CCGGCTTTAA AGCCTAG
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Protein sequence | MKFTDLFVRR PVLASVVSLL ILLIGMRSLT LLEVRQYPET ENTVVTVSTA YPGASSELIN GFITTPLQQA IAEAEGIDYL VATSTQGHSI IEAHMVLNYD SNAAVAEIQA KVASQRNVLP EEAENPVIDS TTGDSTALMY MAFYSEAMSP AQITDYLLRV VRPKLQAVPG VSKAQLIGNK TFAMRIWLDP RRMAALGVTA NDVREVLLEN NYLASVGHTK GAYVAVDLSA TTDISREEDF LNLVVREADG ALVRLRDVAE PQLGAEDYDS SNWYNGKPAI FIGIEQAPGA NPLDIAGHLH DLMPEIRRQL PSGVDGYIVY DASAYIEDAI REVFRTLAEA VLVVLVVIFL FLGSLRAALV PAIAVPLSLI GGAFLMLVLG FSLNLLTLLA MVLAIGLVVD DAIIVVENIH RHLEHGESRF QAAIHGAREL GLPIIAMTTT LVAVYAPIGF MGGLVGTLFT EFAFTLASAV LVSGVVALTL SPMLSSKMLR PVSEAGRFEQ WVERFFTRLA GYYLRLLRYA LESLPVVIVF AGAILCSIYF MYVTSQNELA PTEDQSILFF QATAPQTATI DYDEAYSRQI IDIFESFPEY HESFLLLGQG GDPSTVFGGF KMPVPSQRER SQMEIQPEMQ QKLQGIAGFQ IAVFPRPSLP GSGGGLPLQF VITSAADFSR LDQIAEELIR QSMASGKFAF LQKSVKFSRP KTTLKINRDL AGDLGIRMKD IGQNLGIMLG GGYINWFNLE GRSYKVIPQV DRRYRLDQEM LENYYIRTGA GELIPLATLI SFEETVEPSK RVQFQQLNSL TVQGVMAPGV AVGEALAYLE DKAREIFPSA FSWDYAGESR QYTQQGSALM VTFFFSLLVI YLVLAAQFES WRDPVIILMS VPMSIAGALV FLTLGFATVN IYTQVGLITL IGLIAKNGIL IVEFANQLQL QEGLDKQAAV EKASSIRLRP ILMTTVSMIV AMVPLLMASG PGAVSRFDIG LVVASGLGIG TLFTLFVVPA VYLLVAGDHR EEKEAVQEPM EQESGFKA
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