Gene Noc_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0193 
Symbol 
ID3706227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp211316 
End bp211726 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content54% 
IMG OID637736711 
ProductNUDIX hydrolase 
Protein accessionYP_342256 
Protein GI77163731 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAGC CAACCTTTTT TGTAGTTGCT GTAGCTGTGT TTCTGGTTCA CGATAACCGT 
TTTCTTGCTT TGCGCCGCAG TACTTCCAAG GCTGTAGCGC CAGGGGCATG GGAGGTGATT
TCAGGCAAAG TCGAGCGGGG CGAATTACCC CATGAAACCG CCCGGCGGGA AACCTATGAG
GAAACAGGGA TAACGGTTGC TTTGGATGAG CGGCCTGTCA CCACCTATCA GGCTGATTAT
GGCATGGCTC CTATGATAGT GTTGGTCTAC CGTGGAAAAA GGCTAGCAGG GGAGGCTTCT
CTTTCCAGCG AGCATGAGGC CATGGCTTGG GTAACCGAGG ATGAATTTGC TCAATTGTGC
CTCTATGGGG AACTCGTGGA GGCAGCCCGG TGGGCCCTTA AGGTGCCCTG A
 
Protein sequence
MSKPTFFVVA VAVFLVHDNR FLALRRSTSK AVAPGAWEVI SGKVERGELP HETARRETYE 
ETGITVALDE RPVTTYQADY GMAPMIVLVY RGKRLAGEAS LSSEHEAMAW VTEDEFAQLC
LYGELVEAAR WALKVP