Gene Noc_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0188 
Symbol 
ID3706221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp206424 
End bp207233 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content48% 
IMG OID637736705 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_342251 
Protein GI77163726 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAACGG ATATCGCGCC TCTTAAATCA CAGCTCATCC GGGCAGCGAT GGGAGAGGAT 
AGCTTAGAGT GGCTGTCGCA ATTAGAACTC TACCCGGTAT TGGATTCTAC TAACCGTTAT
CTTTTAGCTC GAGTCAAACA TGGCGCCAAG AAGGGGACAG TTTGTTTAGC CGAGGCCCAG
TCGGCAGGCA GAGGGCGCCA TGGGCGTCTC TGGTTATCGC CTCCCAGTGG TAATATTTAT
CTCTCATTGC TATGGTGTTT TTCTAAAAAT CCGCAATTTT TGTCAGGTCT GAGTATAGCG
GCTGGTGTGG GTGTATTGCG TGCGTTGCAA GACCAGGGTG TCACTAAAAT AGGCTTAAAG
TGGCCTAACG ACGTGCTCTG GGATGATCGG AAATTGGGTG GTATTCTAGT AGAGCTGGTG
CCCAAGGAGG GAGGCACAGG TGTAGTAGTA GGGGTGGGTA TCAATGTAAA TATGCCTATT
CCCTATAGAG AGCAATTAGT TCAGTCTTGT ACTGACTTAG CGGAAGCTAC CCAAAACCGA
TCGGTAGATC GTAATTATTT GGCTGGGCGC CTCATCCATC ATTTTTTGCT GATAATGCAT
AATTTTGAGC GCTGGGGCTT AAGGGATTGT CTTGATGATT GGCGTAGATG GGACGCTTGT
TACCAGCGGG AAGTCTATTT ATACGAGGGC AGTAGGGTGA TCAGCGGCAT TGCTTGTGGT
ATTAATGAGG AGGGAAGCTT GTTATTACAA GAAAAAGGGA GAATATCATG CCACTTCTGT
GGGGAAGTAA GTTTGAGGCG AGTTAAGTGA
 
Protein sequence
MQTDIAPLKS QLIRAAMGED SLEWLSQLEL YPVLDSTNRY LLARVKHGAK KGTVCLAEAQ 
SAGRGRHGRL WLSPPSGNIY LSLLWCFSKN PQFLSGLSIA AGVGVLRALQ DQGVTKIGLK
WPNDVLWDDR KLGGILVELV PKEGGTGVVV GVGINVNMPI PYREQLVQSC TDLAEATQNR
SVDRNYLAGR LIHHFLLIMH NFERWGLRDC LDDWRRWDAC YQREVYLYEG SRVISGIACG
INEEGSLLLQ EKGRISCHFC GEVSLRRVK