| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0176 |
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| Symbol | |
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| ID | 3706209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 195792 |
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| End bp | 196652 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736693 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_342239 |
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| Protein GI | 77163714 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.327955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCGGC GTCTCTGCAT CCTTGGAGTA GGGTTGATTG GGGGCTCTTT GGCGCTGGCT
CTAAAGCAGG CTAAAGGAGT AGGCGAAGTT GTCGGTTATG AAAGAGACCC CATTGCTAGG
GACAAGGCCC TTTCTTTGGG AATCATCGAC CGTGCTGAGC TTGATCTTGC GGAAGCGCTT
CGGGGAGCTG ACGTGGTGGT TTTGGCCGTG CCGCTTGGAG CTATGGAAGA ACTATTGCAG
GCAATGGCGC CTAGTTTGAA ACCAGGGATG GTGGTGACCG ATGTGGGGAG CGTCAAGGGA
AGTGTGGTTG CCTCTGCACG GGCTAAGTTG GGGGAGTACA TTGTAGATTT TGTACCGGGC
CACCCTATCG CTGGGACAGA AAGAAATGGC CCGGAAGCCG CTTTTGCTGA TTTATTTTGC
CTCCATAAGG TACTTCTTAC ACCTTTGCCT GAAAGTCGCG CCGTGGCCGT GCGGATGGTA
AGAATGATGT GGCATCAGGT GGGAGCTGAG GTAATAGAAA CCAGTATTTC TCATCATGAT
CGAATGTTGG CGGGAACCAG CCATCTTCCC CATATATTGG CGTATACTTT AATAGATATG
CTGGCTAAGT TAGGGGAAAC GCAAGAGGCG TTGCAGTTCG CTGCAGGAGG ATTCCGGGAT
TTCTCTCGTA TCGCCTCGAG CGATCCTAGC GTGTGGCGGG ACATCTGTCT TGCTAATAAG
GAACCCTTGC TGGCGCTTCT GGAGCGATTC AGGACCGAAC TTCACGGTAT AGGCGAGGCT
ATTCATCGCG GTGATGGAGC AAAACTTGCG GAAATTTTCG CTCGGGCCAA GGCCGTTCGG
GATACACATT ATAAGCGTTA A
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| Protein sequence | MIRRLCILGV GLIGGSLALA LKQAKGVGEV VGYERDPIAR DKALSLGIID RAELDLAEAL
RGADVVVLAV PLGAMEELLQ AMAPSLKPGM VVTDVGSVKG SVVASARAKL GEYIVDFVPG
HPIAGTERNG PEAAFADLFC LHKVLLTPLP ESRAVAVRMV RMMWHQVGAE VIETSISHHD
RMLAGTSHLP HILAYTLIDM LAKLGETQEA LQFAAGGFRD FSRIASSDPS VWRDICLANK
EPLLALLERF RTELHGIGEA IHRGDGAKLA EIFARAKAVR DTHYKR
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