| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0166 |
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| Symbol | |
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| ID | 3706199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 183948 |
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| End bp | 185312 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637736683 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_342229 |
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| Protein GI | 77163704 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0362369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCC AAGGACGACT CGATGTGCTA CAGAAGAAAG CTAAGGCAGC ATTAGCAATT
CGACACTACA AAGAGGCAGA ATCCCTATTA CAAGAGTTAT TAGAAACCCA AGTCCAGCAC
TTTGGTGATG CAGACACGCA GATCGCCACC ACACTGAACA ATCTCGCAGC TCTTTATGAA
GCCCAAGGGC GGTATGCTCA GGCCGAGGAG CTTTACCATC GCTCGCTTGC TATCCGCGAA
CAGTTGCTAG GCCCGGACCA CCCCGAGGTT GCCACCACAC TGAACAATCT CGCAGCTCTT
TATGAAGCCC AAGGGCGGTA TGCTCAGGCC GAGGAGCTTT ACCATCGCTC GCTTGCTATC
CGCGAACAGT TGCTAGGCCC GGACCACCCC GAGGTTGCCA CCACACTGAA CAATCTCGCA
GCTCTTTATG AAGCCCAAGG GCGGTATGCT CAGGCCGAGG AGCTTTACCA TCGCTCGCTT
GCTATCCGCG AACAGTTGCT AGGCCCGGAC CACCCCGAGG TTGCCACCAC ACTGAACAAT
CTCGCGGCGC TCTATAAGAA ACAAGGGAGG TACGCTCAGG CCGAGGAGCT TTACCATCGC
TCGCTTGCTA TCCGCGAACA GTTGCTAGGC CCGGACCACC CCGAGGTTGC CACCACACTG
AACAATCTCG CAGCTCTTTA TGAAGCCCAA GGGCGGTATG CTCAGGCCGA GGAGCTTTAC
CATCGCTCGC TTGCTATCCG CGAACAGTTG CTAGGCCCGG ACCACCCCGA GGTTGCCACC
ACACTGAACA ATCTCGCAGC TCTTTATGAA GCCCAAGGGC GGTATGCTCA GGCCGAGGAG
CTTTACCATC GCTCGCTTGC TATCCGCGAA CAGTTGCTAG GCCCGGACCA CCCCGAGGTT
GCCACCACAC TGAACAATCT CGCGGCGCTC TATAAGAAAC AAGGGAGGTA CGCTCAGGCC
GAGGAGCTTT ACCATCGCTC GCTTGCTATC CGCGAACAGT TGCTAGGCCC GGACCACCCC
GAGGTTGCCA CCACACTGAA CAATCTCGCA GCTCTTTATG AAGCCCAAGG GCGGTATGCT
CAGGCCGAGG AGCTTTACCA TCGCTCGCTT GCTATCCGCG AACAGTTGCT AGGCCCGGAC
CACCCCGAGG TTGCAATCAT GCTAAATAAT CTTGCTGGCT TGTACAGGGC GACGGGATTG
GGTGAGAAAG CAGAAAGTTT GTATGACAGA AGCTTGGCGG TAATGGAAAA AATATTCGGG
CCAAGACATC CAAATACTGC AATCGTACGA GCCAACCGCG ATGCTTATAA ACATACGGCA
CCTAACAAGG CAAATTCAGC CGACGCCAAA AAGCGGCGCG GCTGA
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| Protein sequence | MKLQGRLDVL QKKAKAALAI RHYKEAESLL QELLETQVQH FGDADTQIAT TLNNLAALYE
AQGRYAQAEE LYHRSLAIRE QLLGPDHPEV ATTLNNLAAL YEAQGRYAQA EELYHRSLAI
REQLLGPDHP EVATTLNNLA ALYEAQGRYA QAEELYHRSL AIREQLLGPD HPEVATTLNN
LAALYKKQGR YAQAEELYHR SLAIREQLLG PDHPEVATTL NNLAALYEAQ GRYAQAEELY
HRSLAIREQL LGPDHPEVAT TLNNLAALYE AQGRYAQAEE LYHRSLAIRE QLLGPDHPEV
ATTLNNLAAL YKKQGRYAQA EELYHRSLAI REQLLGPDHP EVATTLNNLA ALYEAQGRYA
QAEELYHRSL AIREQLLGPD HPEVAIMLNN LAGLYRATGL GEKAESLYDR SLAVMEKIFG
PRHPNTAIVR ANRDAYKHTA PNKANSADAK KRRG
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