Gene Noc_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0161 
Symbol 
ID3706194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp176949 
End bp178229 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content51% 
IMG OID637736678 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_342224 
Protein GI77163699 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACT ACACCAAACC CCATAGCCGG ATATTTCAGC ACCCAAAAAA ATATGTCCAT 
CATTGCCTAT GCAGACTATT ATTTTCTAGT CAGCTACTGC TAATCCTGCC AACCGTAGCG
GCAGCCCTAG AGGCACAACA AGAAGACGCG GCCTCTAGCA TTCAAATCTC CCGCAGTTTG
AAGCGGGTAG AGCCAGACTC CCCAAAAAAC CTTCCTTCCG AGGGTAGCGC CACCATTCAG
GGCAAGGCCG CCACCCAGGA GCCCTTGCAA TTGCTCGGGG AAACCATCAA CCCCGGTGTA
AAAAAACGAC TCTCCTGGAC CCTGAGCCAC ACCTTTGAAG GCATCCCTGT CTCCGCGCCA
ATATTAGTGG TGAATGGTAG CCACCCAGGG CCGACGCTTT GCCTCACCGC TGCGGTCCAT
GGCGATGAGA TCAATGGCAT TGCGATGGTC CATCAAACGA TTGCCGCGCT TAAATCCTCC
CAGCTTAACG GTGCTGTGAT TGGCGTGCCT ATTGTCAATA TGTATGGCTA TCGCCGCAGT
TCCCGTTATT TGCCTGATCG GCGGGATCTG AATCGGCATT TCCCTGGAAG TCCCGAAGGC
AGTTCGGCCG CTCGTATTGC CCATTCTTTT TTCCAACAGG TGATTACCCA CTGCGATGTC
TTAGTAGACC TGCACACCGG TTCTTTTCAT CGGACTAATC TGCCCCAAGT GCGAGCAGAT
TTAAATCATC CCAATATCCT AAAATTAGCT CGTAGTTTTG GTGGCGTTGC CGTCGTTCAC
AGTAAAGGCG TCTCCGGAAC ACTACGGCGG GCCGCCATGG ATAGGGACAT TCCCAGTATT
ACCCTTGAAG CTGGAGAGCC TAAACGCCTG CAACTCCAGG AAGTTCACCA AGGTTTAAAA
GGAATAAAAA ACCTGATGAA CGAATTAGGC ATGGTAGATG AAGGCGAAAC AAAATCGGCT
CCAGAAGCCG TGTTCCACCA AACTAAGTGG ATACGGACCC ACCAGGCCGG GATTCTACTC
TCTGAAGTCG AACTCGGCGA TCCGATTAAG GCAGGGCAGC AATTAGGCAT CATAACTAAT
CCGATTACCA ATCAACAGAT ACCTATCGTG TCACCTTATC ATGGCCAACT CCTGGGCATG
GCCCTTAATC AGGTGACGAT ACCTGGTTAC GCCGCCTATC ATATCGGAAT TAAAGCTGAT
AAACCGGGGC CTATCGAGGA GCTCCCCGAA CATGTCGCTA CCAAAACTGA AATGCTCGAC
TATTCCGATG GCGAAGAGTA A
 
Protein sequence
MKDYTKPHSR IFQHPKKYVH HCLCRLLFSS QLLLILPTVA AALEAQQEDA ASSIQISRSL 
KRVEPDSPKN LPSEGSATIQ GKAATQEPLQ LLGETINPGV KKRLSWTLSH TFEGIPVSAP
ILVVNGSHPG PTLCLTAAVH GDEINGIAMV HQTIAALKSS QLNGAVIGVP IVNMYGYRRS
SRYLPDRRDL NRHFPGSPEG SSAARIAHSF FQQVITHCDV LVDLHTGSFH RTNLPQVRAD
LNHPNILKLA RSFGGVAVVH SKGVSGTLRR AAMDRDIPSI TLEAGEPKRL QLQEVHQGLK
GIKNLMNELG MVDEGETKSA PEAVFHQTKW IRTHQAGILL SEVELGDPIK AGQQLGIITN
PITNQQIPIV SPYHGQLLGM ALNQVTIPGY AAYHIGIKAD KPGPIEELPE HVATKTEMLD
YSDGEE