Gene Noc_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0159 
Symbol 
ID3706192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp172387 
End bp173655 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content45% 
IMG OID637736676 
ProductSodium/hydrogen exchanger 
Protein accessionYP_342222 
Protein GI77163697 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAC TTAATATTGC CACTACGCTG ATTGTGCTGG CCGCATTCTT TGGCTATTTA 
AATGCCCGAT TTTTAAAATT TCCGGATGCT ATTGGGCTGA TGCTCATTGC TATTCTGTTC
TCCGCAGCCA CAATAATGGC CGGTAGCATT TTTCCCGATA TTCTTGAATT CGAGAAAGAA
CTGGTTACGC AAATAGACTT TAAGGAAATC TTGCTTGATG GTTTTTTGAG TATCATTCTT
TTTGCCGGCG CCTTACACAC TGATCTAAAT TTACTTAGGA CCATGCGCGG TCCTATTCTG
ATGTTTGCCA CGTTAGGGGT GCTGCTCTCC ACCTTCTTGG TGGCTGGAAT GATGTTTGTC
GGTTTTCAGG GGTTGGGTTT AGATGTTCCC TTTATTCATT GTTTATTGTT TGGCGCCCTC
ATTTCTCCAA CTGATCCCAT TGCGGTTTTG GGGATTTTGA AAAATGCTGG AGTATCCAAG
GCATTGGAAA TAAAAATAGT AGGAGAAAGC TTGTTCAATG ATGGTATTGG AGTGGTGATA
TTTCTGACTA TTTTCAGCAT TGCTTTCCTT GGTAACGGAG AAATAAGTAG CGTTGATATT
GCGCTATTGT TTTTTAAAGA GGTGGGCGGC GGTATTTTGC TGGGGTTTGG CCTGGGTTAT
CTTGCTTATT TTTTGATGAA ATCTATTGAC AGCTACCAAG TAGAAGTTCT GATTACCCTC
GCCATCGTCC TTGGGGGTTA TTGGTTGGCG CGCTACCTCC ACTTTTCTGG TCCGCTTGCT
ATGGTTGTCG CAGGACTTAT GATTGGCCAT GAACGCTTTC GCTCCAGTGG TATGTCCAAC
ATCACAGAGA CTTACGTGGA TAAATTTTGG GAATTACTCG ACTTATCATT CAATGCCATC
CTTTTTGTAT TGATTGGTCT AGAGCTGACA ATCATTTCTC TTGACGGCGA GTATCTGCTG
GCAGGATTGC TGGCTATACC TGTCGTATTG CTAGCGCGCT ATATGGCACT ATTTTTTCCC
ATCCGCCTCT TTAAAAGACG CCTTGGGCTG GCTCCTCAAA CAGGGATAAT GATGACCTGG
GGTGGTTTGC GCGGAGGCAT CTCTATTGCA CTAGCCTTGT CGCTCACTGC TTCCATGTCC
CGTGAGCTAC TTATTACGGT ATGTTATATC GTGGTGGTGT TCTCTATTAT AGTGCAAGGA
TTGAGCGTTG GGGGTTTGGC TAGGAAATAC CGCAAGCGTT TAGAAGCCGC TGGACAACCT
GCGGATTAG
 
Protein sequence
MDILNIATTL IVLAAFFGYL NARFLKFPDA IGLMLIAILF SAATIMAGSI FPDILEFEKE 
LVTQIDFKEI LLDGFLSIIL FAGALHTDLN LLRTMRGPIL MFATLGVLLS TFLVAGMMFV
GFQGLGLDVP FIHCLLFGAL ISPTDPIAVL GILKNAGVSK ALEIKIVGES LFNDGIGVVI
FLTIFSIAFL GNGEISSVDI ALLFFKEVGG GILLGFGLGY LAYFLMKSID SYQVEVLITL
AIVLGGYWLA RYLHFSGPLA MVVAGLMIGH ERFRSSGMSN ITETYVDKFW ELLDLSFNAI
LFVLIGLELT IISLDGEYLL AGLLAIPVVL LARYMALFFP IRLFKRRLGL APQTGIMMTW
GGLRGGISIA LALSLTASMS RELLITVCYI VVVFSIIVQG LSVGGLARKY RKRLEAAGQP
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