Gene Noc_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0158 
Symbol 
ID3706191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp170569 
End bp172110 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content52% 
IMG OID637736675 
Producthypothetical protein 
Protein accessionYP_342221 
Protein GI77163696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTAACAGATC ATCGAAACCT CTTTTTCCCC ATGTGCTTCT AGCGCCGCTT 
GCGTTGAGCA CGGGACTACT TGGCTTTGCT CCGTCAGCTC AGGCAGTTGA AGTCACCGTT
ACCATAGAAA ACATTTCGCC ATCCAGTGGA CTGTTTTTAA CGCCGGTCTG GGTTGGGTTT
CATGATGGCA ACTTCGATAT CTATGATCTG AACACCCCCG CTTCCTCGGC GCTGGAACAG
CTGGCCGAGG ACGGTAATAA TGCCCCCTTA AGCGCGGAAT TTACCGCCAG TGTGCCTAAT
GGCCTGGATG CCACGATTGC CGATCCAAGT GGGATCCCAG GCCCCCTTGA CCCAGGCAGC
AGAGTTAGCG AAACATTTGA TTTGAGTGCG GACAACCACC GTTTCTTTAG CTATGCGACC
ATGGTGATCC CCTCCAACGA CGCTTTCATT GCTAATGCTA ACCCCCAAGC CCATGAACTA
TTTGACGCCG GGGGGAGTTT CACCGGCCCG ATTAGTTTCA CCGTCTTAGG GACGCAGGTG
AGGGATGCGG GAACGGAGGC CAATACAGAA ACGGATGCGG CCTTCTTCGA CCAGACAACT
CCGGATAGCG GCACTTCTAG TACCGATCCC GTTTTGGTGC ATCCTGGCTT TAATGGTTCA
TCTGGCAATC CCGGAGCTGT GCCCGTGAAT ATTCTTGGCG GCACTTCAAA CGATGGGGTT
TTCTTTGATT CCTTAGCGGC TGATTTTACC CAACCAAGCT ATACCTTGGC TCGTATTACC
ATTACCGGCC CTGGAGATAA ACTTTTTAAT TTTGTCCTTG ACGGCAACCA GGAAGTACCG
CCTGTGGACA CTCCAGCAAA TGGAAGCTGC GTTGGGATTC TGAATAAGGA TGAGACCGCC
TTTACAGCTA ATTGTCACCA TACCGTCCAG GACGTGACAG TGGCTCACAT TCACGAAGCG
CCCGCTGGCG TGAACGGAGG TGTTATCTTC CCCTTTGCTT CTGCGGAAAG CCCCATTCAA
GAAACTTTCA ATTTTACAGC CGAGGACGTG GCTACCCTCA TAGCCGGAAA TTTCTACGTT
AACGTCCATT CTGGAGATTT TCCCGGTGGG GAAGTTCGTG GCCAAATAGC AGCGCCTTTA
AAGGGCAGTT TTAGCGGTTC CTGGTTCAAT CCGAACCGAA GTGGGGAAGG TTTTCTCCTG
GAAGTCACCA ATAGCGATGA TCCCACCCTG GTAGCCACCT GGTTTACCTA TCCGCCTAGC
GGCGATAGCG GAGCACAGGC GTGGTTGGTA GGCAGTGGGC CAATTAGGCT GAATGAGAGT
ATCATCACCA ATACTGTCAT CACGGAAGGA GCCGCGTTTG GAGATGATTT TGACCCTTCA
GCCGTCAACC GGATTCCCTG GGGAACGCTG AAATTCACTT TCACCTCATG CACCACTGGG
ATCGTGGAAT ATGATTCGGT TAGAGAAGAT TTTGGATCGG GCACATTTCA CATCCAGCGT
CTTACCCCGC CCCTCATTGG GCAAGAAGAG GATTGTCCCT AA
 
Protein sequence
MKKFNRSSKP LFPHVLLAPL ALSTGLLGFA PSAQAVEVTV TIENISPSSG LFLTPVWVGF 
HDGNFDIYDL NTPASSALEQ LAEDGNNAPL SAEFTASVPN GLDATIADPS GIPGPLDPGS
RVSETFDLSA DNHRFFSYAT MVIPSNDAFI ANANPQAHEL FDAGGSFTGP ISFTVLGTQV
RDAGTEANTE TDAAFFDQTT PDSGTSSTDP VLVHPGFNGS SGNPGAVPVN ILGGTSNDGV
FFDSLAADFT QPSYTLARIT ITGPGDKLFN FVLDGNQEVP PVDTPANGSC VGILNKDETA
FTANCHHTVQ DVTVAHIHEA PAGVNGGVIF PFASAESPIQ ETFNFTAEDV ATLIAGNFYV
NVHSGDFPGG EVRGQIAAPL KGSFSGSWFN PNRSGEGFLL EVTNSDDPTL VATWFTYPPS
GDSGAQAWLV GSGPIRLNES IITNTVITEG AAFGDDFDPS AVNRIPWGTL KFTFTSCTTG
IVEYDSVRED FGSGTFHIQR LTPPLIGQEE DCP