| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0153 |
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| Symbol | |
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| ID | 3706186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 163071 |
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| End bp | 166208 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736670 |
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| Product | heavy metal efflux pump |
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| Protein accession | YP_342216 |
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| Protein GI | 77163691 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAAAT CTCTGATTCA TGGCGCGCTT GAGCAGCGGG TCGTTATCGT AGTGGTAGCC
CTTGTACTCT TAGGTTTTGG TTTGCGGGCA CCTAGCCAAC TTTCCATGGA TGCCTTTCCG
GATGTGACCA ATATCCAAGT TCAGGTGGCT ACCGAAGCTT TAGGTCGTTC CCCCGAGGAA
ATGGAACGAT TTATCACCGT ACCCGTTGAG ATTGCGATGA CGGGGCTCCC GGGCCTTACC
GAAATGCGCT CCCTTAATAA AAGCGGGCTC TCGATTATTA CCCTGGTTTT TACCGATGAG
ACGGATGTCT ATTTTGCCCG GCAATTAGTA ATGGAGCGCC TCATTGGTGT GCAAGATCGC
TTGCCGCCGG GTGTTACCCC GGTACTTGGT CCGGTGTCAA CTGGGCTTGG CGAAGTTTAT
CAATATACGC TCCAACGGCC GGACGATGGT GGCCGCGCCC TTACCCCTGC CGAGTTGATA
GAACGACGCA CCATCCAGGA CTGGGTGGTG CGGCCCCTGC TGCGCAGTAT CCCTGGGGTG
GCGGAGATTA ATTCTCAGGG AGGGTATGTT AAGCAATATC ATGTTTTGGT CGATCCTGAC
CGGCTGCACC ATTATCAGAT CAGCCTTAAA GAGATTGAAG AGGCCCTAAT CCGTAATAAT
GCCAATAGTG GCGGCGGCGT TCTGCCTCAC TATGCGGAGC AATACTTAAT CCGGGGTCTC
GGCTTGATTG CTAGCATCGA GGATATTGGC AATATTATCC TCAAGGAGTT TGGGGGCACG
CCTATTTATA TCCGGGATGT GGCAAGCATT CGTATTGGGC ACGAGGTTCG ACAGGGCGCC
ATTATCAAAA ATGGCGTGAG CGAGCAGGTA TCAGGGATCG TATTGATGAT TCGCGGCGGT
AACGCCATGG AGGTAGTCGG GCGGGTCAAG GAAAAAGTAG CGGAGATCAA TGAGCAAGGG
CTGCTTCCTG GCGGGCTAGA AATTGTCCCT TATTATGACC GGACCGATTT GGTGGGGGCA
GCGCTGAATA CAGTCACCAA GACCCTGCTT GAAGGTGTTG TATTGGTCAT CGTGATATTG
TTTGTATTCC TCGGCGATAT CCGCAGCAGC TTTATCGTCG TTTGCACCTT AGTGCTTACG
CCGCTACTTA CCTTCATGGT GATGAATCGT TATGGGATTT CGGCCAACCT CATGTCCCTG
GGGGGGCTTG CCATTGCAAT CGGGCTAATT GTGGATGGTT CCGTGGTGGT GGTGGAGAAT
ACTTTTCGCT ATTTGAGCGA GCGTAGAAAT ACCGGCGAAA GCAAGACCCG AATCGTCCTG
GAGGCGGCGG TTGAAGTGGG CAAGCCGGTT ATTTTCGGGG TAGGCATCAT TATCGTGGTG
TTCTTGCCCT TGTTTACCCT GGAGGGAATG GAAGGAAAAA TTTTTGCGCC CCTGGCCCTT
ACCATTTCCA TTGCCCTTTC TATTTCCCTG CTCCTATCCT TGGTTCTCTC GCCGGTGCTC
TGTTCCTATG TGCTTAAAGG AGGAAGCGAG GAAGATACAC GCCTAATCGC CTGGCTGAAA
AGGGGGTATT TAAAACTCCT TGCTTGGGCA CTTAATTGGC GCATTACCGT GGTTTTGAGC
AGCGTGCTTC TTCTCGGCTT AGCGTTAAGT TTGTTTCCGT ATTTAGGTAA ATCCTTCATC
CCGGTTATGA AGGAAGGCGC GCTCACACCA CAGATCAACC GAGTGGCAGG GATGTCCCTC
AGTGAGTCAA TTCGCATGGA GATGTATGCA ACCCGCCTTA TTCGCGAAGT TCCCGGCGTG
GAAATGGTGG TTTCCAAGCT TGGGCGTGGT GAGAGTCCTG CCGATCCGGT GGGGCCGAAC
GAGTCAGATC CCATTGTAAC CCTTAAACCG CGGGCAGAAT GGCCCGAGGG CTGGACCCAG
GATGATATCG ACGCGGCGAT CCGTGATAAG CTTAAGGCTT TGCCGGGCGT GCAAATCGTT
CTCAGCCAGC CCATTGCGGA ACGGGTTGAC GAAATGGTTT CTGGAGTCAA GTCGCAGCTG
GCGATTAAAC TTTTTGGTGA TGATCTGTCC GCCTTAAAAC GCACCGCGGA TGATATTGCC
CGCCTGCTAA GAACGGTTGA GGGAACCCGC GACTTACGAG TGGAACGGGT GAGCGGCCAA
CAATACCTTT TAGTTGATGT CAACCGCCAT GCTATTGCCC GCCACGGGAT CAATGTAGCC
GATGTGCATA GTGTAATTGA AACCGCCATT CGGGGGAAAG TGGCGACTCA TATCTATGAA
GGCGAGCGGC GCTTTGCGGC GTTGGTGCGT TTTCCTGAAA GCAACCGTAA TTCGCCCGAA
GCTATCAGCA GGATTCTACT CACTTCAGCC AGTGGCGCTC GGGTTCCAAT TGAGGATCTA
GCTGATGTTC GGCTAGAGGA AGGCCCTGCC CGGATTAGCC GTGAGAGCGC CAAGCGCCGC
ATTGTCGTCG GCGCTAACCT TGTCGATCGG GATATGGGAG GGTACGTGGA CGAAGTTCAG
CAAAAGATTG CCGAGCAGAT TAAGTTACCC GAAGGGTATT TCCTTGTATG GGGCGGCCAA
TTCGAGAATA TGGAGCGGGC AATGGCGCGT TTGACGATCA TTGTGCCATT AACCATTGCG
ATTATTTTCT TTCTTTTGTT TGTGCTGTTT AACACCGTTC GGTTAGCCGC TTTAATCATC
CTGGTTCTGC CATTTGCCTC CATTGGCGGC ATTGTTGCTC TTTTTCTTAC GGGAGAATAT
TTATCTGTAC CCGCCTCGGT AGGGTTTATT GCCCTTTGGG GCATCGCTGT TCTCAATGGA
GTGGTGCTGG TCTCCTATAT TCGTAGCCTG CGGGATGGGG GATTGGAGCA ATGGGAGGCA
ATAGTGCAGG GGTGTGCCCA GCGTTTCCGT CCTGTCCTCA TGACGGCGAC CGTAGCCATG
TTGGGATTAA CCCCCATGCT GTTCGCAGAG GGTCCGGGAT CAGAAGTACA ACGGCCCTTG
GCTGTGGTTG TTATCGGAGG ATTGATTAGT TCGACCGCGC TCACCCTGAT TGTGGTGCCT
GTCCTCTACC GTTGGTTTGA TGTGCGCCGC AGAGGGGAAG GCGGACAGGT TGAATTTGAG
GGGAAAAGAG ATTCATAG
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| Protein sequence | MVKSLIHGAL EQRVVIVVVA LVLLGFGLRA PSQLSMDAFP DVTNIQVQVA TEALGRSPEE
MERFITVPVE IAMTGLPGLT EMRSLNKSGL SIITLVFTDE TDVYFARQLV MERLIGVQDR
LPPGVTPVLG PVSTGLGEVY QYTLQRPDDG GRALTPAELI ERRTIQDWVV RPLLRSIPGV
AEINSQGGYV KQYHVLVDPD RLHHYQISLK EIEEALIRNN ANSGGGVLPH YAEQYLIRGL
GLIASIEDIG NIILKEFGGT PIYIRDVASI RIGHEVRQGA IIKNGVSEQV SGIVLMIRGG
NAMEVVGRVK EKVAEINEQG LLPGGLEIVP YYDRTDLVGA ALNTVTKTLL EGVVLVIVIL
FVFLGDIRSS FIVVCTLVLT PLLTFMVMNR YGISANLMSL GGLAIAIGLI VDGSVVVVEN
TFRYLSERRN TGESKTRIVL EAAVEVGKPV IFGVGIIIVV FLPLFTLEGM EGKIFAPLAL
TISIALSISL LLSLVLSPVL CSYVLKGGSE EDTRLIAWLK RGYLKLLAWA LNWRITVVLS
SVLLLGLALS LFPYLGKSFI PVMKEGALTP QINRVAGMSL SESIRMEMYA TRLIREVPGV
EMVVSKLGRG ESPADPVGPN ESDPIVTLKP RAEWPEGWTQ DDIDAAIRDK LKALPGVQIV
LSQPIAERVD EMVSGVKSQL AIKLFGDDLS ALKRTADDIA RLLRTVEGTR DLRVERVSGQ
QYLLVDVNRH AIARHGINVA DVHSVIETAI RGKVATHIYE GERRFAALVR FPESNRNSPE
AISRILLTSA SGARVPIEDL ADVRLEEGPA RISRESAKRR IVVGANLVDR DMGGYVDEVQ
QKIAEQIKLP EGYFLVWGGQ FENMERAMAR LTIIVPLTIA IIFFLLFVLF NTVRLAALII
LVLPFASIGG IVALFLTGEY LSVPASVGFI ALWGIAVLNG VVLVSYIRSL RDGGLEQWEA
IVQGCAQRFR PVLMTATVAM LGLTPMLFAE GPGSEVQRPL AVVVIGGLIS STALTLIVVP
VLYRWFDVRR RGEGGQVEFE GKRDS
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