Gene Noc_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0148 
Symbol 
ID3706180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp158586 
End bp159227 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID637736664 
Productradical SAM domain-containing protein 
Protein accessionYP_342211 
Protein GI77163686 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTC TGCGTATTAC TGAAATTTTT TATTCCCTAC AGGGAGAAGC CCGCAGCGTT 
GGGTGGCCCA CGGCGTTCGT GCGTTTAACC GGTTGCCCCC TCCGCTGCCA TTACTGCGAT 
ACTGAATATG CCTTCCAAGG CGGGCGCTGG ATGGCGCTGG ACGGAATTCT TGACGCTGTT 
GCAGAATTTG GGGTCCGTCA TGTCACCGTG ACCGGCGGCG AGCCTCTAGC TCAATCAGCT 
TGCCTAGGAC TTTTAACCCG GCTCTGCGAT GCTGGGTATG AGGTCTCTTT AGAAACTAGT 
GGCGCCTTGG ATATCTCGGC TGTTGATCGC CGGGTGATCA AGGTTATGGA CTGGAAAACG 
CCAGGCTCAG GGGAAGAAGC CCGTAATCTT TCTACTAATC TTGAGCACCT CTCTTCCCAG 
GACCAGGTAA AGTTGGTGCT TTGTAACCGT CATGATTATG ATTGGGCCAA GGGAGTCCTT 
GAGCGTCATC GTTTGACTGA GTATTGTGAA GTTTTGTTTT CCCCCAGCTA CGAGCAATTG 
AGTCCCACTG ATCTAGCTGA CTGGATACTA GCAGATCATT TGCCCGTGAG GATGCAGATT 
CAGCTGCATA AATACCTTTG GGGGGAGGAG CCGGGACGAT GA
 
Protein sequence
MKRLRITEIF YSLQGEARSV GWPTAFVRLT GCPLRCHYCD TEYAFQGGRW MALDGILDAV 
AEFGVRHVTV TGGEPLAQSA CLGLLTRLCD AGYEVSLETS GALDISAVDR RVIKVMDWKT 
PGSGEEARNL STNLEHLSSQ DQVKLVLCNR HDYDWAKGVL ERHRLTEYCE VLFSPSYEQL 
SPTDLADWIL ADHLPVRMQI QLHKYLWGEE PGR