| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0145 |
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| Symbol | tolB |
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| ID | 3706177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 155601 |
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| End bp | 156905 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736661 |
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| Product | translocation protein TolB |
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| Protein accession | YP_342208 |
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| Protein GI | 77163683 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAACA CGAGAGTTTG GTGTAAAATT ATAGGGATGT TGGCGCTGCT AGTGTGGCTA
GTGTCTTCGC CCAGTGTTTT TGCCGTGCTC ACCATTGAAA TCACCGGTGG CACGGAAGCA
GCGTTACCTA TTGCCATTGT CCCCTTTCAG AATGAAGGGA GCACTCCCCC TGAGAATGTG
GCCGCTGTCA TCGCTGCCGA TTTGGCCCGC AGCGGGCGCT TTGCCCCGTT GCCAGAGGAA
GACCTGATTT CCCGCCCTCG CAATGCTTCT GATATCCAGT TCCAGGATTG GCGGCGGCTG
GGTTCGGAAG GGTTGGTGAT TGGAAAGGTG ATCTCTTTAG GTGCGGACCG TTATGAAGTG
CGCTTTCAAC TCTTTGATAT CTATAAGGAA GAGCAATTAG TAGGACGCCG TTACCAAGTT
CCAGCGGCAG GACTGCGCCA TCTAGCCCAT CAAATTGCTG ATCTTATCTA CGAGACCTTG
ACCGGTGAAA AAGGAATTTT TACTACTCAT ATTGCCTTTG TGACCGTTTC TAGGGCTGCC
CATGGAGCTA AACAATATTC CCTGCAAGTA GCCGATGTAG ATGGCCATAA TCCCCATACT
ATTCTGCGCT CGAAGGAACC CATTTTATCG CCGGCCTGGT CCCCCGATGG GACTCAGCTC
GCCTATGTGT CCTTCGAGCG CAGGCGCTCG GAAGTTTTCG TTCAGGAATT GCGCACAGGG
CAGCGACAAT CCGTAGCCTC TTTTTCTGGG ATTAACAGCG CCCCCGATTG GTCTCCGGAT
GGAGGCAAAC TTGCTCTGGT CCTCTCCAAG GAAGGTAATC CGGAAATTTA TATTCGTGAT
TTGGCAACCG GCAGGCTTAC CCGTCTTACC CATAATACTG CCATTGATAC CGAGCCCGCT
TGGGCGCCTG ATGGAGGGAG TATTGTCTTT ACTTCGGATC GGGGAGGGCG GCCTCAACTT
TATCAGATTC CGGTTTCAGG GGGACGAGCG CAACGTTTAA CCTTCGATGG AGCCTATAAT
GCTTCTGCTT CGTTTGCGCC GGACGGCCGC CGCTTGGCTT TAATTCATGG GGATAAGGGA
CAGTTTCATA TTGCCGTATT GAATTTACAA AGTAAGGAAT TGCAGGTGCT GACCGAGACT
CGGATGGATG AATCACCAAG CTTTGCCCCC AATGGCCGAA TGATTCTTTA TGCCACCTCG
AGTCCTCAGG GAGGCGTCTT AGCCGCCGTC TCCACCGACG GTCGGGTTCG CCAGCGTTTA
GCGCAGCAAG GTGATGAAGT CCGGGAACCC GCCTGGTCCC CTTGA
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| Protein sequence | MMNTRVWCKI IGMLALLVWL VSSPSVFAVL TIEITGGTEA ALPIAIVPFQ NEGSTPPENV
AAVIAADLAR SGRFAPLPEE DLISRPRNAS DIQFQDWRRL GSEGLVIGKV ISLGADRYEV
RFQLFDIYKE EQLVGRRYQV PAAGLRHLAH QIADLIYETL TGEKGIFTTH IAFVTVSRAA
HGAKQYSLQV ADVDGHNPHT ILRSKEPILS PAWSPDGTQL AYVSFERRRS EVFVQELRTG
QRQSVASFSG INSAPDWSPD GGKLALVLSK EGNPEIYIRD LATGRLTRLT HNTAIDTEPA
WAPDGGSIVF TSDRGGRPQL YQIPVSGGRA QRLTFDGAYN ASASFAPDGR RLALIHGDKG
QFHIAVLNLQ SKELQVLTET RMDESPSFAP NGRMILYATS SPQGGVLAAV STDGRVRQRL
AQQGDEVREP AWSP
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