Gene Noc_0139 details

Gene Information

• Locus tag: Noc_0139
• Symbol: ruvA
• ID: 3706171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 151463
• End bp: 152062
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637736655
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_342202
• Protein GI: 77163677
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGTC GTCTGCGGGG TATTTTATTG GAAAAACGGG CTCCCTTTTT ACTATTAGAT 
GTACAAGGTG TAGGTTATGA GCTGGAAGCT CCTTTGTCTA CGTTCTATGT CCTTCCCGCT 
ATGGGCGCTG AGGTGATCCT ATACACTCAT CTGGTGGTGC GAGACGATGC CCACCTGCTG 
TATGCTTTCG CCAGTGAAAA GGAGCGCGGG CTGTTCCGGA GTCTTATTCG GGTTAATGGT 
GTGGGCGCTA AATTGGGATT GGGAATTCTT TCTGGAATAG AGGCCGAATC CTTTACCCGC 
TGTGTCCAGG AAGGAGATAC GGTGAGTCTG ACCCGGTTGC CTGGCGTAGG TAAAAAAACG 
GCGGAACGCC TCATTGTGGA GATGCGGGAT CGGCTGCTCG ATATGCCGGA GAGTGGAGTG 
GCAGGGATGC GCCCCGATAG GGTTGATGGT TCCGCCCCGG GGACAGTGGC GGAAGCGGTC 
AGCGCCCTGG TGGCGCTAGG TTATAAACCT AATGAAGCTA GCCGGGCGGT GCGCCGCCTC 
GATACGGAGG CATTGACCAC GGAGGAGATC ATCCGGCAGG CGCTACAGCG GATGTTATAA 

 

Protein sequence

MIGRLRGILL EKRAPFLLLD VQGVGYELEA PLSTFYVLPA MGAEVILYTH LVVRDDAHLL 
YAFASEKERG LFRSLIRVNG VGAKLGLGIL SGIEAESFTR CVQEGDTVSL TRLPGVGKKT 
AERLIVEMRD RLLDMPESGV AGMRPDRVDG SAPGTVAEAV SALVALGYKP NEASRAVRRL 
DTEALTTEEI IRQALQRML