| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0122 |
|---|
| Symbol | |
|---|
| ID | 3706154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 129464 |
|---|
| End bp | 130822 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637736638 |
|---|
| Product | adenosylmethionine--8-amino-7-oxononanoate transaminase |
|---|
| Protein accession | YP_342185 |
|---|
| Protein GI | 77163660 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000591474 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTA TGAATAATCA ACAATGGATT GAGCGGGATC TAGGAGTGCT CTGGCATCCT
TGTACTCAAA TGAAAGATCA TGAGCAGTTA CCTCTTATTC CCATTCGTCG GGGAGAGGGC
GTGTGGCTGG AAGATTTTGA TGGACGACGT TATTTGGATG CTATTAGCTC TTGGTGGGTG
AACTTGTTCG GCCATACTAA TCCACGAATA AATGCAGCGA TAGCGCAGCA GCTAGACAAG
TTGGAGCATG TTTTATTGGC TGGCTTTTCC CATGAGGCGG TTGTTCGTCT CTCCGAACGG
TTGGTGGATA TTACCCCGGC GGGATTGAGC CGTTGTTTTT ATGCCGATAA CGGCTCCTCG
GCGATAGAGG TGGCGCTAAA GATGAGCTAC CAATATTGGC GCAACGTGGG TAAATCCCGT
AAAACCCGCT TTATTTCCCT TACTAATGGC TACCATGGCG AAACTCTGGG CGCATTGTCG
GTAGGGGATG TGGCTTTGTA CAAGGAGACT TACCAGCCCC TTTTGATGGA TGTGATTACG
GTTCCCTCCC CGGATTGTTT TTTCCGGGAG GAGGGCGAGT GCGAAGCTGC CTATTGCCAG
CGCCAGTTTG TTCATATGGA AAGAGCCCTA GAAGACTATG GGGAGGAGAC TTGCGCCGTT
ATTGTAGAGC CGTTGGTCCA GTGTGCCGGC AATATGCGGA TGTATGATCC GGTTTATTTG
TCTTTATTGA GGGAAGCCTG TGATCGGTAT GGCGTTCATT TGATCGCCGA TGAGATCGCG
GTGGGCTTTG GCCGCACCGG AACCATGTTC GCCTGTGAAC AAGCGGATAT CACACCGGAT
TTTCTTTGTC TGTCCAAAGG GCTGACGGGG GGCTATCTTC CCTTGTCGGC AGTGTTGACT
ACCGAGACAG TATATCAGGC CTTTTACGAC GACTATTCCA CCTTGCGTGC TTTTCTCCAT
TCCCATAGTT TTACTGGCAA TGCCCTTGGT TGCAGCGCTG CCTTAGCGAT CCTCGATATC
TTTAAGGAGA ACTCGGTGCT TGAGAATAAC CGGTTATTGG CGCAAACGAT GCGGGAGAGC
ACTGAGCATT TTGCTGACCA TCCCCATGTG GCGGAAGTGC GCCAGCATGG CATGATTCTG
GCTATCGAAA TGGTTAAAAA TAAGGCCTCC CGCGAACCCT ATCCTTGGCA AGAGCGGCGC
GGACTGCAAG TCTATCAACA TGGCTTGCAA AAAGAAATGC TGCTCCGGCC ATTAGGTAAT
GTGGTCTACT TTATGCCGCC TTATGTGGTT ACCCCTGAGC AAATTACTGA TTTAGCCCAG
GTCGCATGGG AAGGCATTAA TCTTGCCACG CAAGATTAA
|
|---|
| Protein sequence | MNAMNNQQWI ERDLGVLWHP CTQMKDHEQL PLIPIRRGEG VWLEDFDGRR YLDAISSWWV
NLFGHTNPRI NAAIAQQLDK LEHVLLAGFS HEAVVRLSER LVDITPAGLS RCFYADNGSS
AIEVALKMSY QYWRNVGKSR KTRFISLTNG YHGETLGALS VGDVALYKET YQPLLMDVIT
VPSPDCFFRE EGECEAAYCQ RQFVHMERAL EDYGEETCAV IVEPLVQCAG NMRMYDPVYL
SLLREACDRY GVHLIADEIA VGFGRTGTMF ACEQADITPD FLCLSKGLTG GYLPLSAVLT
TETVYQAFYD DYSTLRAFLH SHSFTGNALG CSAALAILDI FKENSVLENN RLLAQTMRES
TEHFADHPHV AEVRQHGMIL AIEMVKNKAS REPYPWQERR GLQVYQHGLQ KEMLLRPLGN
VVYFMPPYVV TPEQITDLAQ VAWEGINLAT QD
|
|---|
| |