| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0115 |
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| Symbol | |
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| ID | 3705875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 121067 |
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| End bp | 122944 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736631 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_342178 |
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| Protein GI | 77163653 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGTG GCAATTTTCA CGGCCCTTAT CTTCGACTTC AAGACTTTGT GGCCTATTCG
GACAGATATA TCTTGCTAAC TTCGACCACC CACAGTGTTC AAGCATTGGC GCGTTTGCTG
CGTTATGCTA AAGGTTATCG TCGGCGAATT CTGGCGGCTA CTGCCTGCTC AATCATTAAC
AAGCTATTCG ATATCGCCCC GGAAATATTG ATTGGGGTGG CTATCGATGT AGTCGTCAAT
AAAGAAGACA GTTTTGTCGC TCGGTTGAAC TTCACTACGC CTGAAGAACA AATTCTAGTA
TTGGCAATAC TCACCTTTTT TATTTGGGTA GGAGAGTCGC TGTTTGAATA CCTCTACAAG
ATTCTGTGGC GCAACCTAGC TCAGCGGTTG CAGGCGGATC TGCGCCAGGA CACTTATGAA
CATGTCCAAC AGCTGGATAT GAGTTTTTTC GAGTCGAAGA GTTCCGGCCA CCTGGTGGCA
ATCATGAACG ATGACGTCAA CCAGCTTGAG CGCTTTCTGG ATGGAGGCGC TAATGCCCTA
ATCCAGGTAG GGGTAGCAGT GATAGCGGTA GGTGCAGTGT TCTTCATCTT ATCACCGCTG
ATCGCACTGC TCGCTTTCAC CCCGGTTCCG CTGATTATTT GGGGCGCTTT CTTCTTTCAG
CGCAAGGCCG GTCCCCTCTA CAATGATGTG CGCGAGAAGG TTGGCGACTT AGCAAGCCGC
CTGGGCAACA ATTTGAGTGG CATTGCCACT ATCAAGAGTT TTACCGCCGA GGCACGTGAG
GCCGAGCGCC TGAAAGCAGT CAGTGAAACC TATGTAGAAG CCAATCGCAG GGCGATTCGG
GTGAGTTCAG CATTTATCCC GGTAATTCGC ATGGCTATTC TGGTTGGCTT TCTGGCCACC
TTCACTATCG GCGGTATGAT GGCGTTGCAG GGCAGTCTTA ATGTAGGTGC CTATGGCGTC
CTAGTGTTTC TAACGCAACG TCTGCTGTGG CCGCTAACCG GCTTGGCCGA GGTTATTGAT
CTTTTCGAGC GGGCCATGGC CAGCACACGG CGCATTCTCG ATCTACTGGA AGTAACAGTA
GAAGTGCAGG ATGTCAGCAA TCGCTCTCTT GCGACCCCAG TTCGCGGGGA AGTCCACTTC
CAGGGCGTTA GCTTTCGTTA CGCGAGCAGC GGTGCCGGCG TGGAGAACAT CAATCTATCT
GTGCCAGGGG GCAGTACCTT GGCCCTAGTG GGGGCAACGG GATCAGGCAA ATCGACCCTG
ATCAAGCTAC TACTGCGTTT CTATGATCCC CATGAGGGAC AAGTATGCAT TGATGGCCAG
CCGGTTAGGG AGATCAGTTT ATACTCTCTG CGCCAAGCCA TCGGCCTAGT TAGCCAAGAG
GTTTATCTGT TTGAAGGCAG TATCCGCAAC AATATCGCCT ACGGACGTCC CGATGCCGAC
GAGGAGTCGA TCATCAAGGC TGCTATCACT GCCGAAGCTT GGAACTTCAT CCATGCGCTG
CCGCAGGGGC TAGATACCCC GGTGGGTGAG CGCGGCGTGC GCCTCTCTGG CGGTCAGCGC
CAGCGCTTGT CCTTGGCCCG GGCTTTAATT AAAAATCCGC CCATCCTGGT GCTGGATGAG
GCTACCAGCG CCGTCGATAA TGAAACCGAG GCAGCTATCC AGCGTTCACT TCAGCGTATT
GGCCATGACC GAACGGTGAT TATGATCGCC CACCGACTAT CAACCATCGT ATACGCCGAC
CGGATCGTAG TGATTCATCA AGGTCGGGTC ATCGAACATG GTACCCATGC TGAGCTGCTT
GAAGCTAATG GCCGCTATGC TGCCCAGTGG CGTGTACAAA CCGGCTTAGC TAAAGCCGAA
GATACGCTGC TGGGATGA
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| Protein sequence | MSSGNFHGPY LRLQDFVAYS DRYILLTSTT HSVQALARLL RYAKGYRRRI LAATACSIIN
KLFDIAPEIL IGVAIDVVVN KEDSFVARLN FTTPEEQILV LAILTFFIWV GESLFEYLYK
ILWRNLAQRL QADLRQDTYE HVQQLDMSFF ESKSSGHLVA IMNDDVNQLE RFLDGGANAL
IQVGVAVIAV GAVFFILSPL IALLAFTPVP LIIWGAFFFQ RKAGPLYNDV REKVGDLASR
LGNNLSGIAT IKSFTAEARE AERLKAVSET YVEANRRAIR VSSAFIPVIR MAILVGFLAT
FTIGGMMALQ GSLNVGAYGV LVFLTQRLLW PLTGLAEVID LFERAMASTR RILDLLEVTV
EVQDVSNRSL ATPVRGEVHF QGVSFRYASS GAGVENINLS VPGGSTLALV GATGSGKSTL
IKLLLRFYDP HEGQVCIDGQ PVREISLYSL RQAIGLVSQE VYLFEGSIRN NIAYGRPDAD
EESIIKAAIT AEAWNFIHAL PQGLDTPVGE RGVRLSGGQR QRLSLARALI KNPPILVLDE
ATSAVDNETE AAIQRSLQRI GHDRTVIMIA HRLSTIVYAD RIVVIHQGRV IEHGTHAELL
EANGRYAAQW RVQTGLAKAE DTLLG
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