| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0113 |
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| Symbol | |
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| ID | 3705873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 117611 |
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| End bp | 119053 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637736629 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_342176 |
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| Protein GI | 77163651 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.335173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAC GCTACGATGT TGTGATCATT GGCGCTGGGC CGGCTGGTTA TACGGCGGCT
ATCCGGTGCG CTCAGCTTGG TTTGCAGACT GCTTGTATCG ACAAGTGGAT CGCTGCCGAT
GGCAGACCTG CTTTAGGAGG CACCTGTCTT AATGCAGGCT GCATCTCTTC CAAAGCCTTG
CTGGACTCCT CGGAACTTTA TCAACGGGCG CAAAAGGAGT TTGCCGAACA TGGAATCAAG
GTCGAGCAAG CCGGTGTGGA TGTGACGGCG ATGCAGGCCC GCAAGGACCG TCTGGTGCAT
CGTCTCACAG CAAATATCGC TGCGCTATTC GAGGACCGCC AGATCAAATG GCTTCCGGGG
CATGGGCGGT TATTGGAAGA TAATCGGGTG GAATTCACGC CCCATGGATT AGATCGTCCG
GAGATACTGG CGGCGAAGAG CGTTGTTTTA GCCAGTGGTT CCCAGCCTAT GGAACTAGGC
GCGGCGCCCA TTGATGGAGA GCGGGTGGTG GATTCCACGG GGGCCTTGTC ATTCCAGGAA
GTTCCTCAGC GTTTGGGAAT TATTGGTGCT GGAGTCATTG GGGTAGAGCT AGGCAGTGTC
TGGACCCGTC TAGGGGCAAA AGTGACTTTG CTTGAAGCTC AGGATACTCT TTTGCCAATG
GCGGATATCA CCATTTCCCA AGAAGCTTAT AAGCAATTTA AAGACCAAGG GCTGGATATC
CGTTTAGGTG CCCGCGTCGT TTCCACCCGC GTTAGCTCGA AGCAAGTGAC TGTATGCTAT
CGGATCGGCG AAAAGGAGTA TGAACTTGAG GTGGATAAGC TGGTCGTCGC CGTAGGGCGG
CAGCCTTGTT TGGATAACCT TTTTGCCCTG GAAGCGGGTC TGTTATTGGA TGAAAGGGGT
TTCATCCATG TAGATGAGTA TGGTACCACG AATCTCCCTG GGGTCTATGC GGTAGGAGAT
GTAGTGCGGG GTCCCATGCT AGCCCACAAG GGTTCCCAGG AAGGAATCGC GGTGGCAGAG
ACTATCGCCG AGGGTAAAAA AACCGCGGTG AAACGGAATA GCATCCCCTG GGTGATCTAC
ACAGAGCCTG AAATCGCCTG GGCGGGACGT ACCGAACAAG CTTTACGAGA TGCCGATATT
GATGTGCGCG TAGGCACCTT CTATTTTGCC GACTCTGCCC GTGCTAACGT AATGAGCGGC
AGCAAAGGCT TGGTCAAAAT AATAGCGGAT GCCATGACCG ATCAGATTCT AGGGGTCCAC
ATTATTGGAC CTTGGGCCTC GGAGCTGATT GCCGAAGCTG TGTTGGCCAT GGAATTTGCT
GCTAGCAGCG AAGATTTAGC GCGGACCATT CATGCCTATC CCAGCCTGGC GGAAGCATTA
CACGAAGCAG CCTTAGATGT GGATAATCGC GCCATTCATA AGATAGGGCG GAAAAAAGAA
TAA
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| Protein sequence | MSERYDVVII GAGPAGYTAA IRCAQLGLQT ACIDKWIAAD GRPALGGTCL NAGCISSKAL
LDSSELYQRA QKEFAEHGIK VEQAGVDVTA MQARKDRLVH RLTANIAALF EDRQIKWLPG
HGRLLEDNRV EFTPHGLDRP EILAAKSVVL ASGSQPMELG AAPIDGERVV DSTGALSFQE
VPQRLGIIGA GVIGVELGSV WTRLGAKVTL LEAQDTLLPM ADITISQEAY KQFKDQGLDI
RLGARVVSTR VSSKQVTVCY RIGEKEYELE VDKLVVAVGR QPCLDNLFAL EAGLLLDERG
FIHVDEYGTT NLPGVYAVGD VVRGPMLAHK GSQEGIAVAE TIAEGKKTAV KRNSIPWVIY
TEPEIAWAGR TEQALRDADI DVRVGTFYFA DSARANVMSG SKGLVKIIAD AMTDQILGVH
IIGPWASELI AEAVLAMEFA ASSEDLARTI HAYPSLAEAL HEAALDVDNR AIHKIGRKKE
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