| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0111 |
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| Symbol | sucA |
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| ID | 3705871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 113444 |
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| End bp | 116266 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637736627 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_342174 |
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| Protein GI | 77163649 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCTA CTGTCAAAAA ACAAGCAAGC CCTTCCCCAT TAAATGCTGC CAATGCCTCT
TATTTGGAGG CGCTGTACGA AAAATTTTTA AAAGATCCTA ATACCGTACC CGCCCATTGG
CGAATTTGGT TCAAGCGTCT CCAGGCAGGT GTTCCGGAGC AGGCCGCTCC TGAATTTCCT
GCCCGCTCTC CAGGGCCAGC GGTGCAGCCA TCAGCACCGT CAGCAGTGAT GACCGAGGGG
TTAACGGCGG AGGCGGCTGA AAAACAAATC GCAGTGCTTC AACTCATCAA TGCCTACCGT
TTCCGGGGCC ATCAAAAGGC CAATATCGAC CCCTTGCGCA TTTATGATCG TCCGGTGGTT
TCCGATCTTG ATCCTGTCTT CCATGGTTTG ACGGAAGAAG ATATGGGCAA AGTCTTCAGT
ACAGGATCGC TGATTGGGAT CGATCAGGCT CCTCTGGAAG AAATTTTCGC CTTAATAAAG
AAGATCTATT GCCATACCAT TGGCGCTGAG TATATGCACA TCACTGAGAC CGCCGAGAAA
CGCTGGATTC AAAGTTATCT GGAGGGAGCC CAGGACGATC CGGGCCCGTC TGTAGAATTA
CAGCGCCATA TTCTGGAGCG GCTTACAGCG GCTGAGGGGC TGGAGCGCTA TTTACACACC
AATTACGTGG GTCAGAAACG TTTTTCCCTG GAGGGGGGAG ATAGTTTGAT ACCCCTTCTG
GATAATTTGA TCCTTTATGC AGGTAGTAAG GGGGTGGGGG AAATCGTCAT TGGCATGGCT
CACCGGGGAC GGTTGAATGT GCTGGTGAAT ACTTTGGGTA AACTACCCCG TGATTTATTC
ATGGAGTTTG AGGGCCAACA TGAAACGGAC AACAAACGCT CGGGAGACGT CAAGTATCAT
TTAGGATTCT CGGCGGACGG GGATACCCCA GGTGGGCCGG TACATATTAC CCTGGCGTTT
AACCCCTCCC ATTTAGAAAT TATTGACCCG GTAGTGGAAG GTTCGGTGCG GGCCCGCCAG
CAACGGCGCA AGGATTGGTT AGGCGATGAG GTGATACCGG TGCTTATTCA CGGAGATTCC
GCCTTTGCCG GTCAAGGTGT GGTCATGGAA ACCTTTAACA TGTCCCAATC CCGGGGATTT
TTCACCGGTG GCACCCTCCA TATCGTGATC AACAACCAGA TTGGTTTTAC CACCAGCAAC
CCCCTGGATA CCCGTTCCAC AGTTTACTGC ACGGATGTGG CTAAGATGGT ACAAGCCCCA
ATTTTTCATG TGAATGGGGA TGATCCCGAA GCGGTTATCT TTGTTACCCG CTTAGCGCTT
GATTACCGCA TGACCTTTAA AAAAGATGTG GTGATCGATC TGGTGTGCTA TCGGCGTCAA
GGGCATAACG AAGCGGATGA GCCGGCGGTC ACCCAGCCGC TTATGTACCA GAAAATCCGC
TCCCATCCTA CGGTTCGCCA TCTTTATGCT GAGCGATTGG CAGCGCAAAA TATCATTGCA
TCCGAGGAGG CGGATCGCAT GATGAACAAT TATCGGCAAA CCCTAGAGCA AGGGACCAAT
GTGGCGCCTT ATGCGGAAGA AGGCGCCCGT TCTTCAAGGG TGAACTGGAA GCCTTTTTTG
GGAACCCAAT GGGATCAGCC GGTAGAAACC GAAGTGCCTT TGCCGCGGCT CCAAGAGCTT
GCGGCCCATA TCCAACAGCT TCCCAAAGGG TTTGAGCTTC ACTCCCGGGT AGGTCATATT
TTGGCCGATC GCCGTAAAAT GGCTGCGGGG GCCTTGCCTA TCGATTGGGG ATTTGCGGAG
ACTCTGGCCT ACGCTACTTT GTTAAATGAG GGGTTCTCGG TCCGGCTCAC GGGTCAAGAC
AGTGGCCGCG GCACTTTTTT CCATCGCCAT GCCGTGCTTT ATAATCAGAA AGACGGCCAG
GTCTATGTCC CCTTGGAGCA GGTAAACCCC GTGCAAACGG ATTTTAGTAT TATTGACTCC
CTCCTCTCGG AAGAAGCGGT ATTGGCCTTT GAATATGGGT ACGCCGCCAC GGAGCCCAAT
ACCTTAGTGA TCTGGGAGGC GCAGTTTGGG GATTTTGTCA ATGGTGCTCA AGTTGTCATT
GACCAGTTTC TTGCTTCCGG GGAAGCAAAA TGGTCCCGCT TGTGCGGGTT GGTACTGTTT
CTTCCCCATG GCTATGAAGG CCAGGGGCCG GAACATTCTT CGGCCCGGTT AGAGCGTTTT
CTACAGCTTT GTGCGGAAGA TAATATCCAG GTCTGCGTAC CGACCACACC GGGGCAAATG
TTTCATATGC TACGGCGGCA AATGCTGCGG CCTTACCGCA AACCTCTCGT TGTGATGACG
CCAAAGAGTT TATTGCGCCA CCGGCTTTCG GTCTCATCCT TGGATGAGTT CTGCAGCGGC
GCTTTTCGGT TAGTGATCGG TGAAGTAGAT GATATTAAGC CTGCCATGGT GAATCGCGTT
ATTCTGTGTG CTGGCAAAGT ATACTATGAT TTGCTGCAAG CTCGGCGGGA GCAGAAACGG
CAAGATGTGG CCATTCTCCG TTTGGAACAG CTCTATCCGT TTCCCCAGCA GCAATTAGAG
AGAGAGCTTG AACGTTACCG CAAGGCCAGG GAGATTGTCT GGTGTCAAGA AGAACCTCAA
AACCAAGGAG CATGGGATCA ACTTCATCGT CCTTTGCAAG GATGTTTGAG TCGAAACCAG
TCCTTGCATT ACACAGGCCG GGCCTCGTCG GCGGCACCCG CGGTGGGTTA CTTTAACTTG
CATCTTGAAC AGCAGCGTGC GGTGGTAGAA GAGGCTTTTG GTTCGATGAA AGAGAGCCAG
TAA
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| Protein sequence | MDATVKKQAS PSPLNAANAS YLEALYEKFL KDPNTVPAHW RIWFKRLQAG VPEQAAPEFP
ARSPGPAVQP SAPSAVMTEG LTAEAAEKQI AVLQLINAYR FRGHQKANID PLRIYDRPVV
SDLDPVFHGL TEEDMGKVFS TGSLIGIDQA PLEEIFALIK KIYCHTIGAE YMHITETAEK
RWIQSYLEGA QDDPGPSVEL QRHILERLTA AEGLERYLHT NYVGQKRFSL EGGDSLIPLL
DNLILYAGSK GVGEIVIGMA HRGRLNVLVN TLGKLPRDLF MEFEGQHETD NKRSGDVKYH
LGFSADGDTP GGPVHITLAF NPSHLEIIDP VVEGSVRARQ QRRKDWLGDE VIPVLIHGDS
AFAGQGVVME TFNMSQSRGF FTGGTLHIVI NNQIGFTTSN PLDTRSTVYC TDVAKMVQAP
IFHVNGDDPE AVIFVTRLAL DYRMTFKKDV VIDLVCYRRQ GHNEADEPAV TQPLMYQKIR
SHPTVRHLYA ERLAAQNIIA SEEADRMMNN YRQTLEQGTN VAPYAEEGAR SSRVNWKPFL
GTQWDQPVET EVPLPRLQEL AAHIQQLPKG FELHSRVGHI LADRRKMAAG ALPIDWGFAE
TLAYATLLNE GFSVRLTGQD SGRGTFFHRH AVLYNQKDGQ VYVPLEQVNP VQTDFSIIDS
LLSEEAVLAF EYGYAATEPN TLVIWEAQFG DFVNGAQVVI DQFLASGEAK WSRLCGLVLF
LPHGYEGQGP EHSSARLERF LQLCAEDNIQ VCVPTTPGQM FHMLRRQMLR PYRKPLVVMT
PKSLLRHRLS VSSLDEFCSG AFRLVIGEVD DIKPAMVNRV ILCAGKVYYD LLQARREQKR
QDVAILRLEQ LYPFPQQQLE RELERYRKAR EIVWCQEEPQ NQGAWDQLHR PLQGCLSRNQ
SLHYTGRASS AAPAVGYFNL HLEQQRAVVE EAFGSMKESQ
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