Gene Noc_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0098 
Symbol 
ID3705897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp98555 
End bp99265 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID637736614 
Producthypothetical protein 
Protein accessionYP_342161 
Protein GI77163636 
COG category[S] Function unknown 
COG ID[COG3330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.888213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGA CCCGCCTCCC GCTCCAGCGG AAAGCCCAGC TGCACCCATC CAAGGAAGAA 
AAGACGCCGT TATCTCAGCA AGAGCTGCTC CGGATCAGCC AAGAAACAAG AGATTGCTTT 
CTTCCACCAG CCTCCCCAGA TAAAACCCAG TTAGGGTTGA TGGTCGTAAA CCCCTATCGT 
GTTTACGCTT ATTGGTCAAT TCTGAACCAA GATCTTATCC GCGCCCATAA AAAACTCGGG 
ATAAAGAAAT CCGCTCAATG GGCGCTGCGG TTTTATGACT TTACTGCCGG GAAGCTTGCT 
ATTAGCTCCA GTTTTGAAGT GGCTATCCCG AGGAAAGCCC ATCATTGGTA TATAGATCTT 
TGGGCTGACA ATAAACATTA TATGGCAGAG CTTGGATTAG CGGATTCTGA AGACCAATTT 
GTTGCCTTGG CACGCTCTAA TATGATAGAA ACTCCCCGTG CTGGTTCTGC CGATCCTACC 
GCCCCGGTGA TTTTCACGGG CCACGACCTT CAACCTTTCC ATCCCGCTAA AACTTTTCCC 
CTAGAATTTT CTGTTTCTCC AGAGGAGCGG GCTGTTCGAA GCCAGGAACT TACCGCCAGC 
TATTTTTCCT TTCTAGCGGA ATCGTCACAA ATTCAGCCTA AGGAAAATAT GCTTTCCAAG 
CCTAAATCGC TCTCCCAATG GTCCGCAAGC TTGCCCAAGA GGCGGTACTA G
 
Protein sequence
MKKTRLPLQR KAQLHPSKEE KTPLSQQELL RISQETRDCF LPPASPDKTQ LGLMVVNPYR 
VYAYWSILNQ DLIRAHKKLG IKKSAQWALR FYDFTAGKLA ISSSFEVAIP RKAHHWYIDL 
WADNKHYMAE LGLADSEDQF VALARSNMIE TPRAGSADPT APVIFTGHDL QPFHPAKTFP 
LEFSVSPEER AVRSQELTAS YFSFLAESSQ IQPKENMLSK PKSLSQWSAS LPKRRY