Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0089 |
Symbol | |
ID | 3705888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 91778 |
End bp | 92896 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637736607 |
Product | nitrite reductase (NO-forming) |
Protein accession | YP_342154 |
Protein GI | 77163629 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2132] Putative multicopper oxidases |
TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TAATAAAGTA TTTTGCTTTC TATCTAGCGA CATTTTCATC GGTTTTGTAT GCTGATGGAG AAGCATCATC TTATATTGCT AATATTGGCA CCCATGCAAA CTTAAAAGAT CTAGAAAGAG TGAGGCAGGA ATTAGTTGCG CCGCCACATT TGCCTGATCA TCAACAAGCC TATTCTGGAA AGCCTCGAAT TGTAGAAATA GAAATGGTCA TTGAGGAAAA AGAGGTGGAA ATAGAACCCA ATGTTTTTGT TCAAGCAATG ACCTTCAATG GTACCAATCC AGGGCCTATT ATTGTTGTTC ATGAGGGTGA TTACGTCGAG TTAACACTTA AAAACCTTGA TACAAACATG TTGTTACATA ATATCGATTT TCATCCTGCA ACAGGTGCAT TGGGTGGTGG CGCGCTTACT AAGGTGGCTC CTGGTCAGCA AGTAACATTA CGATTCAAAG CAGATAAAGC TGGAACTTAT GTCTATCACT GTGCTCCAGG CGGGCTAATG ACTCCTTACC ATGTTGTTTC AGGTATGTAC GGCGCGATAA TGATTTTTCC AAAAAAAGGT TTAAGAGATC AAAATGGGAA AAAGGTTACC TATGACAAGG CTTATTATGT TGGTGAGCAA GGTTGGTATA TTCCAAAAGA TAAAAATGGA AAGTACAAAC GATACGCAAA TGCAATAGAA CCTTATGGTG ATACTTTAGA GGTTATGCGG GGACTTGTTC CAACACACGT CACATACAAT GGGTCGAAAG GCGCTTTAAC GGGAGACAAT GCAATGAAGG CCAAGGTTGG TGATTCAGTC TTGTTTATTC ATTCGCAAGC CAATGAAGAT TCCCGTATTC ACTTAATTGG CGGACACGGA GACCTAGTTT GGCCAGGTGG CTCTTTTAAG AATACTCCTA TGGTTGACAA GGAAACATGG CATGTAAATG GTGGAGAATC CGTCGCTGCA CTTTACACAT TTAAACAGCC AGGGCTTTAT GCTTATCTCA ATCATAATTT GATTCAAGCG TTTATGCTTG GCGGCGCTGC TCATGTGAAG GTAGATGGTG AGTGGAATAA TGATCTAATG GAACAAGTTG TTAAGCCTAG TCCTATTAAT GCAGATTGA
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Protein sequence | MKKLIKYFAF YLATFSSVLY ADGEASSYIA NIGTHANLKD LERVRQELVA PPHLPDHQQA YSGKPRIVEI EMVIEEKEVE IEPNVFVQAM TFNGTNPGPI IVVHEGDYVE LTLKNLDTNM LLHNIDFHPA TGALGGGALT KVAPGQQVTL RFKADKAGTY VYHCAPGGLM TPYHVVSGMY GAIMIFPKKG LRDQNGKKVT YDKAYYVGEQ GWYIPKDKNG KYKRYANAIE PYGDTLEVMR GLVPTHVTYN GSKGALTGDN AMKAKVGDSV LFIHSQANED SRIHLIGGHG DLVWPGGSFK NTPMVDKETW HVNGGESVAA LYTFKQPGLY AYLNHNLIQA FMLGGAAHVK VDGEWNNDLM EQVVKPSPIN AD
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