Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0080 |
Symbol | |
ID | 3705879 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 85910 |
End bp | 86765 |
Gene Length | 856 bp |
Protein Length | |
Translation table | |
GC content | 50% |
IMG OID | 639330280 |
Product | |
Protein accession | |
Protein GI | |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGAA TCAAATCGCC AACCTTGCTG GAAGATGTTC GCCGCATCAT GCGGCTCAAG CATTATTCGC TGCACACCGA GCGCTCTTAT TGCGAGCGGA TTAAAAATGC GTTGGTGTTT TTATACAAGC AGGTTCTGGA TATGCCGCTG ACCAAGCGTA TCGAGGCCAT TCGCTCCAAA ACCAGTCGGC GTGTGCCAGT AGTGTTGTCG TTGGACGAGA TCAGGCAAGT ATTGCCACGG GTTGAAGGCG TGGCGCAGTT AGTGGTGAAA CTGTTATACG GCAGCGGCTT ACGGATTAGC GAGGCCGTTC GGTTGCGGGT GCAGGATCTC GATTACGATT ATAAACAGAC TACCGTGCGC TCTGGTAAGG GCGATAAAGA CAGGGTAACC CCGCTTTCTG CGGCCATGAT ACCGTTACTG CAAAATCATT TTAGAAAAGG TCAAGGCGAT TCACGAGCAG GATTTGGCCG ACGGCTTCGG TGCAGTGTAT TTGCCGTATG CGCTGGCAAA AAAATATCCT CATGCCGAAC GGGAATGGGG CTGGCAATAT GTGTTTCCGG CCCGTTCGCT ATCGGTAGAT CCTCTGTCGG GTTTGACTCG ACGCCATCAT ATAGATCAAT CGCTGATTAA TAAGGCGATC AAGGCTGCGG TTCGACAAGC GGGTATTACT AAGCGAGTTT CTGCACATAC CTTTCGGCAC AGTTTTGCCA CGCATTTGCT GCAACGCGGC ATTGATATTC GAACGATTCA AGACTTGCTT GGACATCGTG ATTTAGAAAC GACGATGATT TATACCCATG TTTTAAATCA GGGCGGTCAT GGGGTGACAA GTCCATTGGA CGATTTGGAG GGATAG
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Protein sequence | |
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