| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0078 |
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| Symbol | |
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| ID | 3705916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 79413 |
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| End bp | 85016 |
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| Gene Length | 5604 bp |
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| Protein Length | 1867 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637736598 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_342145 |
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| Protein GI | 77163620 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAG CATTTATCAA GGTCAAGGGC GCACGGCAGA ATAACCTTAA AGGGCTTAAT
CTCAAATTTC CCCTCAATGA GCTGATTGTG ATCACGGGAG TCAGCGGCTC GGGTAAATCC
TCTCTGGCTT TCGACACCAT TTATGCCGAG GGGCAGCGGC GCTATGTGGA AACCTTCTCC
CCCTATGCCC GGCAATTTCT GGATCGGATG GACAAGCCCC AAGTGGATCG TATCGAGGGA
ATTCCCCCGG CCATTGCCAT CGATCAAATC AACCCGGTCC GGACCTCCCG CTCCACTGTA
GGGACCATGA CGGAGTTGAA TGATCATCTG AAGCTTTTAT TTGCCCGGGC CGGAAAACTT
TACTGCCAGG GCTGCGGGCA AGGGGTGCGG CGGGACACGC CGGAGGGTAT TTATAAGGAG
CTTCTTCTTC ACTCCCAAGA ACAAGACGAC ACTCCCCGGA TCTTAATCAC TTTTGAGATT
ACCGTTCCCG AAAATTTTTC CTTCCAGGAA GTAAAAGACC AGCTCCTACG GCAGGGCTAT
ACTCGCTTCC ATCACCAGCA TGATCAGGTA TTAGAGGCAA TTCAGGATCG GGTCCGCTTG
GAGCCGAGCC GGCGGGAGCG GATTATGGAA GCCCTGGAAA CGGCTCTCAA ACATGGCCGT
GGCCATGTTA CGGTTTATCC CCTAGATGAG CACCGCCAAC CTCAACAGCC CTGGCGCTTT
TCTTCTGATC TCCACTGCCC CCAATGTGAT ATCGCCTACC AGGACCCCTT TCCTAGCCTG
TTTTCTTTTA ACTCCCCTTT GGGGGCCTGC GGGACCTGCC GGGGCTTTGG CCGGACCATG
GGGATTGACT ATGATTTAGT GGTACCTGAT GAAAATAAAA CCCTGGCCGA GGGGGCCATC
AAACCCTGGC AGAGCGCCAG CTATGAAGAA TGTCAGCAAG ATTTGATGCG TTTTGCCCGC
AAGCGGGGGA TTCCCACTCG CCTCACCTGG CGCGAGCTTA CCCCTGAGCA GCAGCATTGG
GTGCTGGCGG GAGAAGGGGA ATGGGAGGAA AATAAGTGGT ATGGAGTCCA GCGTTTTTTC
GACTGGCTGG AAAGCAAAAG CTACAAAATG CACATCCGGG TGCTGTTGTC TAAATACCGG
GCTTATCATC TTTGCCCCAC CTGCCAGGGG GCGCGCCTCA AACCCGAATC CTTGCTGTGG
CGGCTGGGAA CCAAAGCCGG CGCCGACGAG GTATTACCAG ACAAAAGACG GTTTATGCCT
GCGGGAGTAC GATTCTCCCA GCGGCGATTG GCGGCTTTAC CTGGTCTGAC CCTCCATGAT
GTGATGCAGC TTTCCCTTAA ACGCTGCCAG CAATTTTTTG CTCAGCTTAC CCTATCTGCT
CCTTTGGACG AAGCTGCTGA TTTGCTGCTA GGTGAGATTC GCTCCCGGCT CAATTATCTG
GTGGAGGTGG GGCTAGGTTA TCTGACGTTG GACCGTCAAT CACGGACCTT AAGCGGGGGA
GAAGTGCAGC GGATCAATTT GACCACTGCT TTGGGCACTT CCCTGGTCAA TACTTTGTTT
GTCTTGGATG AGCCGAGCAT TGGTTTACAC GCCCGTGATT TGCAGCGCAT CATCCGGATA
CTGCAACGCC TGCGGGATGC GGGCAATTCC CTGCTCCTAG TGGAGCATGA TTCCCAGATA
ATGCTGGCCG CCGACCGCAT TTTAGATCTG GGGCCTGGAC CGGGAGAACG GGGCGGTCAA
CAAGTATTTT TCGGCCCTCC CCAGGAATTG ATGCAAGCCA AACGTTCCCT CACCGGCCAA
TACTTGACAG GTAAAAAGCG GGTCGTCTCC GAACGTCGTA AAACCAGAAA GCTCCCAGCG
TCGGCCTATG TGGAAATCCG GGGCGCTGCG GAGCACAATC TCAAAAATAT TGATGTCCGC
TTTCCCCTCA ATGGCCTGGT TTGCGTGACC GGCGTTAGCG GTTCGGGTAA ATCCACCCTG
ATTCAAGAAA TTCTGTATAA GGGATTACGC AAGCTCAAAG GCAAACCGGT GGGCACACCC
GGCCGTCATC AAGCCCTTGA AGGCCATGAA CATATTCAGA CGGTAGTGTT GGTGGATCAA
TCCCCTATCG GTAAAACCAC CCGCTCTAAT CCCATTAGTT ATGTGGGCGC CCTGGATGGC
CTGCGCAAAG CCTTTGCCGC CGAGCCCCTG GCCCAGGAGC GAGGCTATCA TGCCGGCACC
TTTAGCTTTA ACACCGGGAA GGGACGCTGT CCCACCTGTG GCGGCCGTGG TTTTGAGCAG
GTGGAAATGC AGTTTCTCAG CGATATCTAT CTGCGCTGCC CCGATTGTAA TGGTCAGCGT
TACCGACCTG AAATACTGGA GGTCAAACTG CAACCTTCGG CCCAGGGACT GGGCAAATCC
ATTGCCGAGG TGCTGGCCAT GACGGTGGCC GAAGCCCTAG ATTTTTTCGC CGATTACCCG
GAGATCAAGC GGGGAATCGA ACCTCTCCAA GCAGTAGGGA TGGGTTATGT GACATTGGGT
CAGCCGGTGC CCACCTTAAG TGGAGGCGAA GCCCAGCGGC TTAAACTGGC GGGACACCTG
GCCAAGGCGC GGGGGAATAA ACAGGGCCGC AACACGCTGT TTTTACTTGA CGAACCCACA
ACGGGCCTCC ATTTCGATGA TATTGCCACC TTGCTCCAAG CCTTTTACCG CCTACTGGCG
GAAGGTCACT CTCTGGTGGT CATTGAACAT AACCTGGAGG TAATCCAAGC AGCGGACTGG
ATCATTGATT TAGGGCCCGA GGGGGGCGAA GGCGGAGGCA AGGTGATCGC TATGGGGTCT
CCCCAGAAGG TCGCCCGGTC CCAGCATAGT CACACGGGCC AGGCTTTGCG GGACCACGCC
CAAGCGTTTG ATGAGATCTT CCAGGCTGCC TCTGCCGTGG GCGAAGCGCC CGCACAATAC
AGGACAGCCT GCGGAACTGC TCAAACCGAG GCTGCCCCCC AGGAATCGGG CGCGGCAGCA
GAAGGCAATG GGTTCATTTA TATCCATAAT GCCCGGGAGC ATAACTTAAA GAATATTGAT
GTCCAAATTC CCCGGGAGCG CCTTACCGTG ATTACCGGCA TCTCCGGTTC CGGGAAGAGT
ACAGTGGCAT TTGATATCCT CTTTGCCGAA GGGCAGCGCC GTTATTTGGA ATCTCTTAAT
GCCTATGCCC GGCAGTTTGT TCAACCGGCT GCCCGTCCCG ATCTGGACGC CATCTTTGGT
ATTCCACCCA CAGTAGCTAT CGAGCAGCGT ACCAGCCGAG GGGGACTCAA GAGCACGGTA
GCCACCCTCA CCGAGATTTA CCATTTCCTG CGCCTGCTCT TCGTTAAGCT GGGACAGCAA
CATTGCCCCG ATTGCAAAAT TCCCATTGAG GCCCAAACCC TAGAGGCTAT CCAGGCCCGG
CTTATGGGGG ACTATCGGAA CCGCCGTTTG GGGATATTGG CCCCCTTGAT CGTCGCCCGC
AAAGGCTATT ATACCGAGCT AGCCAAATGG GCTGCCGCCA AAGGATTTAC CCACCTGCGG
GTGGATGGGA CGCTGCTTCC CACAGATCCC TGGCCTCGGT TGGATCGCTT CAAGGAACAC
TCCATTGAAT TGCCGGTAGG AGAGCTCAAG GTTACCCCCG CAGCAGAAAA AGAACTCCAT
GCCCTGCTGG AGCAGGCTCT TAATCTGGGC CAGGGCAGGG TGGAAATTCT TCTTCCCCAA
AAGAAGCAGA AGATTCTCTA CTCAACTCAA CGGGCTTGTC CAAGTTGTAG CCGCAGCTTT
GGAGAACTGG ACCCTCGCCT GTTCTCCTTT AACTCCCCAC AAGGTTGGTG CCCCCGCTGT
TATGGCACCG GGCGGGTGCT GCCCAATTTT GATGGAGAGC AAACCGGGGA AGAAAAAGAA
TGGGCCGAGA AGCAGGGAAA TCCGGGCCAA ATTTGCCCTA CTTGCCAGGG ACAGCGCTTG
CAGCCCGAAG CCCTGGCGGT GCGTTTCCAG GAGCGGAATA TTGCTGAATT TACCGGCATG
CCAATAGCAG TGGCCGAGGC CACCTTTCAG TCCATGAAGC TGCAAGGGCG GGCGGCGGAC
ATCGCCCGAG ATATCCTGCC CGAGCTGCGA ACTCGGTTGA AATTCCTCAG AGAGGTGGGA
TTGTCTTATT TAACGCTGGA CCGGGCCGCC CCAACCCTCA GCGGTGGGGA AGCCCAGCGT
ATCCGCCTAG CTTCCCAGCT CGGCTCCAAC CTGCGGGGTG TATGTTATAT CCTGGATGAA
CCCACCATCG GTCTTCATCC CCGGGACAAT AGAATGCTTC TGAATACCTT GGGCAAGCTG
GAGGGCCAAG GCAATACCAT TGTGGTGGTG GAGCATGACG AAGACACTAT CCGGCGGGCC
GAACATGTCA TTGACTTGGG GCCAGGGGCC GGGGTGAATG GAGGCAAAGT GGTGGCTGCG
GGCACGGTGG AAGCACTGCT CCAACATCCA GAATCCGTCA CCGGGCGCTG CTTGGCCCAA
CCCTTGCCCC ATCCCCTCAT GGAAAAGCGC CGCCCCGAAA CAGCCGAAGC CCACCTGGAG
ATTCGGGGAG CTTCCCTGCA CAATTTGAAA AGTCTAACTC TCCGTTTACC CCTAAGACAG
TTGGTGGGGG TGAGCGGAGT GAGCGGCAGT GGCAAAAGTA CTCTGATACG GCAGGTGCTC
CATGGGAACC TCCTGCGCCT GCTGAATCGA AAGCAGACGG CCCAACATAA GGAGACTACC
ACCTTTCAGG GCTGTCAGGA AATTCGTGGC TGGAAAGCTA TCCAGCGGGT GCTGGAAGTC
GATCAGACCC CCATTGGCAA AACGCCCCGC TCTTGTCCGG CTACCTATGT GGGTTTTTGG
GACTCTATCC GGCGTTTGTT TGCCGACACG CCGGAGGCCC GTATCCGGGG TTATGGAGCA
GGCCGATTCT CCTTTAATAC CAAGGAAGGC CGGTGCCCAG AATGCGAGGG TCAGGGCGTA
AAAAGAATTG AAATGAGCTT TTTACCGGAT GTGACCGTTC CCTGCGAATC CTGCCGCGGA
GCCCGTTTTA CCCAAGAAAC TCTGATGATC CGCTACAAGG ACAAAAACAT TGGTGAGATT
TTAGCCCTGA GTGTTGATCA AGCCGTTGAG TTTTTTGCCG CCCATAAACG AATTCATCGG
CCTTTGCAGT TGCTGCAAGC GGTAGGATTA GGCTACCTGA GCCTTGGTCA ACCGAGTCCG
ACCCTCAGCG GGGGCGAGGC CCAGCGAATT AAGTTGGTGA CGGAGCTAGC CAAGGCCCCT
CTGAATCCCT ATCGTAGTGC TAATCAGCAC ACCCTTTATC TCTTGGATGA ACCCACCATT
GGACTCCACA TGGCGGATGT GGAAAAACTT ATCCGGGTTT TGCACCAGTT GGTGGAAGTG
GGCAATACCG TGATCGTCAT TGAGCATAAT CTGGACATTA TTGCCGAGGT GGACTGGCTT
ATCGACCTGG GTCCGGAAGG AGGTGATGGC GGGGGGCAAA TTGTTGCCCA AGGAACACCA
GAGACCGTTG CAAAAGTTAA AAAAAATTCT TATACAGCAA AATTCCTTAC CCGTTTTTTA
AAAACGCGCC GTGCCATAAA TTGA
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| Protein sequence | MSKAFIKVKG ARQNNLKGLN LKFPLNELIV ITGVSGSGKS SLAFDTIYAE GQRRYVETFS
PYARQFLDRM DKPQVDRIEG IPPAIAIDQI NPVRTSRSTV GTMTELNDHL KLLFARAGKL
YCQGCGQGVR RDTPEGIYKE LLLHSQEQDD TPRILITFEI TVPENFSFQE VKDQLLRQGY
TRFHHQHDQV LEAIQDRVRL EPSRRERIME ALETALKHGR GHVTVYPLDE HRQPQQPWRF
SSDLHCPQCD IAYQDPFPSL FSFNSPLGAC GTCRGFGRTM GIDYDLVVPD ENKTLAEGAI
KPWQSASYEE CQQDLMRFAR KRGIPTRLTW RELTPEQQHW VLAGEGEWEE NKWYGVQRFF
DWLESKSYKM HIRVLLSKYR AYHLCPTCQG ARLKPESLLW RLGTKAGADE VLPDKRRFMP
AGVRFSQRRL AALPGLTLHD VMQLSLKRCQ QFFAQLTLSA PLDEAADLLL GEIRSRLNYL
VEVGLGYLTL DRQSRTLSGG EVQRINLTTA LGTSLVNTLF VLDEPSIGLH ARDLQRIIRI
LQRLRDAGNS LLLVEHDSQI MLAADRILDL GPGPGERGGQ QVFFGPPQEL MQAKRSLTGQ
YLTGKKRVVS ERRKTRKLPA SAYVEIRGAA EHNLKNIDVR FPLNGLVCVT GVSGSGKSTL
IQEILYKGLR KLKGKPVGTP GRHQALEGHE HIQTVVLVDQ SPIGKTTRSN PISYVGALDG
LRKAFAAEPL AQERGYHAGT FSFNTGKGRC PTCGGRGFEQ VEMQFLSDIY LRCPDCNGQR
YRPEILEVKL QPSAQGLGKS IAEVLAMTVA EALDFFADYP EIKRGIEPLQ AVGMGYVTLG
QPVPTLSGGE AQRLKLAGHL AKARGNKQGR NTLFLLDEPT TGLHFDDIAT LLQAFYRLLA
EGHSLVVIEH NLEVIQAADW IIDLGPEGGE GGGKVIAMGS PQKVARSQHS HTGQALRDHA
QAFDEIFQAA SAVGEAPAQY RTACGTAQTE AAPQESGAAA EGNGFIYIHN AREHNLKNID
VQIPRERLTV ITGISGSGKS TVAFDILFAE GQRRYLESLN AYARQFVQPA ARPDLDAIFG
IPPTVAIEQR TSRGGLKSTV ATLTEIYHFL RLLFVKLGQQ HCPDCKIPIE AQTLEAIQAR
LMGDYRNRRL GILAPLIVAR KGYYTELAKW AAAKGFTHLR VDGTLLPTDP WPRLDRFKEH
SIELPVGELK VTPAAEKELH ALLEQALNLG QGRVEILLPQ KKQKILYSTQ RACPSCSRSF
GELDPRLFSF NSPQGWCPRC YGTGRVLPNF DGEQTGEEKE WAEKQGNPGQ ICPTCQGQRL
QPEALAVRFQ ERNIAEFTGM PIAVAEATFQ SMKLQGRAAD IARDILPELR TRLKFLREVG
LSYLTLDRAA PTLSGGEAQR IRLASQLGSN LRGVCYILDE PTIGLHPRDN RMLLNTLGKL
EGQGNTIVVV EHDEDTIRRA EHVIDLGPGA GVNGGKVVAA GTVEALLQHP ESVTGRCLAQ
PLPHPLMEKR RPETAEAHLE IRGASLHNLK SLTLRLPLRQ LVGVSGVSGS GKSTLIRQVL
HGNLLRLLNR KQTAQHKETT TFQGCQEIRG WKAIQRVLEV DQTPIGKTPR SCPATYVGFW
DSIRRLFADT PEARIRGYGA GRFSFNTKEG RCPECEGQGV KRIEMSFLPD VTVPCESCRG
ARFTQETLMI RYKDKNIGEI LALSVDQAVE FFAAHKRIHR PLQLLQAVGL GYLSLGQPSP
TLSGGEAQRI KLVTELAKAP LNPYRSANQH TLYLLDEPTI GLHMADVEKL IRVLHQLVEV
GNTVIVIEHN LDIIAEVDWL IDLGPEGGDG GGQIVAQGTP ETVAKVKKNS YTAKFLTRFL
KTRRAIN
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