Gene Noc_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0055 
Symbol 
ID3705931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp53559 
End bp54056 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content49% 
IMG OID637736580 
Producthypothetical protein 
Protein accessionYP_342127 
Protein GI77163602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.513038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC CAGTTCACGA TACGATAAAG AGTTCTCTCC AAGCAGCCGA AGGTCTGTAT 
CACCGGCTGG TATTGCTAGT CGGTGAGGCT GGTTCCGACA AAACGGAAGC CTTTCATGAC
GTCGCGGATG AGCTTGGCAC CGAGGTTGTT AATGTCAATC TGGTGCTCTC GAGCGAGTTG
CTGGAGTTGA CAGCTAAGCA ACGGGCACTG CGCCTGCCGG AGATACTGGA TCGTATCGTA
GATAAAGTTC AATCGACCGT GGTGCTCGAT AACCTCGAAA TCCTGTTCGA CAAGGAATTG
AAACAAGATC CTTTACGGCT CTTACAGAGT ATTTCTAGGA ATCGCCCGGT AGTGGCGTCT
TGGAATGGGG TAATTAAAGA AGGCAAGCTC ATTTATGCTG AAATAGGCCA TCCTGAATAT
CGGCGCTATG ACATGGCTGA CACATTGATC GTGAGCATGG ATGGAACGGC GACAATCGAC
TTAGAAAAAA ATAATTAG
 
Protein sequence
MAEPVHDTIK SSLQAAEGLY HRLVLLVGEA GSDKTEAFHD VADELGTEVV NVNLVLSSEL 
LELTAKQRAL RLPEILDRIV DKVQSTVVLD NLEILFDKEL KQDPLRLLQS ISRNRPVVAS
WNGVIKEGKL IYAEIGHPEY RRYDMADTLI VSMDGTATID LEKNN