Gene Noc_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0054 
Symbol 
ID3705930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp51909 
End bp52556 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID637736579 
Producthypothetical protein 
Protein accessionYP_342126 
Protein GI77163601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0442309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAAG CCCGATATCC CCGTAATGAA GATGGCTTAA CGCCAGGTCA GCAAGTGTTC 
GCGGATTTGT ACCGGGCCGG CCCCGAGAAG GTGCGGGGCA ATGCCCTGGC CTGCTACCGG 
CAAGCTTTCC CCCGGGCGGC CTTGAGCACG GCGAAAGTCC AAAGCTCACG GCTTCTTCGA 
AACCCGGGGG TAGCGGCCTA CCTGCAATCC AAGCGCCAGG CGGCCGAAGC CGAGGCGGAC 
GTTAAAGAGG TCCAGGTTCT GAAAGAGTTG GCCCAGGTCG GGTTTTCAGA CATCCGCGCC 
TTGTTTGATG GACAGGGGCG GCTCAAACCC ATGGACGCCC TGCCCAAGCA TATCGCGGCG 
GCCATTGCCG CGGTGGATGT GGTCGTGATG AAAGACGAAA AGAAGACGGC GCCCCTTTAC 
GTTTACAAAA TCAAGCTCTG GAATAAGCTC GATGCCTTGG AGCAACTCGA TAAGCAATTG 
GGCATGTTTA AAGAGCAACG GGAGGTGAAG GTCCAAGGCG AACTCTCCCA TTTGCTCGAA 
GAAATCTCAG GCGCCCCGCT CAGCACGCCC ATGGGCCGCA TTGCCCTGCA ACAGGAGCAG 
GAAAAGGCCG CCGGGGAACC CGCCCACGGG CCTAAGCGAC ACGATTAA
 
Protein sequence
MRQARYPRNE DGLTPGQQVF ADLYRAGPEK VRGNALACYR QAFPRAALST AKVQSSRLLR 
NPGVAAYLQS KRQAAEAEAD VKEVQVLKEL AQVGFSDIRA LFDGQGRLKP MDALPKHIAA 
AIAAVDVVVM KDEKKTAPLY VYKIKLWNKL DALEQLDKQL GMFKEQREVK VQGELSHLLE 
EISGAPLSTP MGRIALQQEQ EKAAGEPAHG PKRHD