| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0048 |
|---|
| Symbol | |
|---|
| ID | 3705924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 47396 |
|---|
| End bp | 47731 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637736573 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_342120 |
|---|
| Protein GI | 77163595 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.169923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGAGAT GTTCAATTGA TTTGCGCAAA CGAGTAATCG ATTTTGTAAG GGGCGGTGGA
AGCAAGGCGG AAGCGGCCCG GAGATTTCAG GTAGGCCGCG CGAGCATTTA TCGCTGGTTG
TCGCAGGATG ATGCGCTGTG TTACGAGCGT CCCGGCCCTC GCCGTTCACA CAAGCTGGAC
TGGGAGGCTT TACGGGTCCA TGTGGAAGAC AAGGCTGATC TCACCTATAA AGAACGCGCC
CGGCATTTTG GCGTTTCGTA TTACTGTATT TGGCATGCGA TGCACAAAAT GGGGTTAACC
CGTAAAAAAA ATGACGGGGT ACACGCAGCG CTGTAA
|
|---|
| Protein sequence | MTRCSIDLRK RVIDFVRGGG SKAEAARRFQ VGRASIYRWL SQDDALCYER PGPRRSHKLD
WEALRVHVED KADLTYKERA RHFGVSYYCI WHAMHKMGLT RKKNDGVHAA L
|
|---|
| |