Gene Noc_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0047 
Symbol 
ID3705923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp46609 
End bp47358 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content42% 
IMG OID637736572 
Producthypothetical protein 
Protein accessionYP_342119 
Protein GI77163594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.185506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATT CAATTGGGAG GCCACTACCA AACTGCCGCC ATCTTCGATC CTTACCTCTC 
CCGAGCATAG CTCAGTATTG GGCGATCGAA ACAGGAACCA ATCCTAGCGA TAACCTTCGT 
GATCTGGCCT TCGCCGTACA TTGTTGGCTA TTGTGTGAGA AGGAATTTAG ATCAGCTTAT 
CGTAAATCAG GTGATCCTAA ATTTCTTGAG GCCGTTCTTC CCAATAACAA AGAAAAGTTG 
GAACAGATCG GAGAAGCCTT AAAAAAGCTT TACCTGGATA ATATCCTTGA TGCGCAGATT 
GAGCAAACTC TTGCTGCAAT TACAATTTAT GCCGAGGATA TAAAGGATTG GTGCCAACGC 
AATCACCGGC CGTTGCCCCG GTTCTGGTTT CCCCTTTCTG AGGCTGCAGC TAGCCATGAG 
TCCGGTTCAT ATCAGCCATC ACCGAAAAAG TTGATAGCCG AAGCAGAGGA AGTTGGTAAA 
AATCTCTCAG GGGTACTAAA AGCAAGCGAT AAAATGCCCG TGGATCCTCC CAGGAAGCGA 
TCATTAATTA TTCCAAGCAC TGCAAATCAA TATAATACTA AAGATAAAAA ATCTTACCTG 
AATATCGAAC TTGTGAGGCG AACATACGAT CACCTATGTG AAACTCAAAA AGATAGGCAT 
TTAGCTCCCA AGGAAGAATT GGCATTTGTT ATTAATAAGC CCGCTCACTT TGATACTGAC 
AAAATTATAG AGCTATATCT AAATTTATAG
 
Protein sequence
MSNSIGRPLP NCRHLRSLPL PSIAQYWAIE TGTNPSDNLR DLAFAVHCWL LCEKEFRSAY 
RKSGDPKFLE AVLPNNKEKL EQIGEALKKL YLDNILDAQI EQTLAAITIY AEDIKDWCQR 
NHRPLPRFWF PLSEAAASHE SGSYQPSPKK LIAEAEEVGK NLSGVLKASD KMPVDPPRKR 
SLIIPSTANQ YNTKDKKSYL NIELVRRTYD HLCETQKDRH LAPKEELAFV INKPAHFDTD 
KIIELYLNL