Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0035 |
Symbol | gpsA |
ID | 3705968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 34256 |
End bp | 35290 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637736559 |
Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
Protein accession | YP_342107 |
Protein GI | 77163582 |
COG category | [C] Energy production and conversion |
COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTAC CCGTGGCGCT TCAAAATGAT AAGGAAAATT TAAGAACCTT AGTGGTAGGG GGTGGTTCCT GGGGTACTGC TTTAGCCATT TTGCTAGCTC GTAATCGGGT ACCTACTCTA CTATGGGCGC GGGATTTGGC ACAGGTGTCC GCCATGATCA TTACTCGCCG GAATGATCGT TACTTACCCC AGGTACCTTT TCCTCCCTCT CTAGAACCTA TTACTGACTT AGAGGGAGCT TTATCCCAAA CGAAGCAGGT GCTTGTAGCA GTACCAAGCT GTGGTTTTCG GCCAATATTA GAGCGTTTAG CTGGACATTT ATCCAGCCAC GTTCCTCTAA TCTGGGCAAC CAAGGGTTTG GAGCCGGGCA CTGGCCGGCT GTTGCATGAG GTGGTGCTGG AACTCTTAGG TTCTGGGTGG CCTATGGCGG TGATGTCAGG GCCTACTTTT GCTCATGAAG TAGTTGCAGG GCTGCCCACC GCAGTGACGG TAGCCGCTAC CGAATCAGAG ATTGCTACCT GTTTTGCCCG CAGCCTTCAT GGAGATACCT TTCGAGTTTA TACTAGCGAT GACTTAATCG GTGTGCAATT AGGTGGAGCG GTAAAAAATG TGCTTGCCAT TGCCGCTGGC ATTAGCGACG GCTTGGGATT TGGTGCAAAT ACTCGAGCAG CTTTAATTAC CCGTGGGCTT ACTGAGTTGG TGCGTTTTGC CCTTGCCTGG GGGGGGCAGA GGGAAACCTT AATGGGGTTA TCAGGATTAG GTGATTTAGT ATTGACATGC ACTGATGATC AATCTCGTAA CCGGCGCCTT GGCCTAGCTT TAGCCCAGGG AAAACGATTG GACGAAGCTT TAACGCTTAT TGGCCAAGCA GTGGAGGGAG CAGCTGCCGC CAAAGTCGTG GTGGCAAGAG CCAAACAACT TGCAGTCGAG ATGCCTATTG CAGAGCAAGT CTACCAGGTA TTGTACGCTG GACGGCACCC TCGGCAGGCA GTTGAGGTTC TTTGTCGCCG GGAACAAAAA CCTGAATATG CATAA
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Protein sequence | MALPVALQND KENLRTLVVG GGSWGTALAI LLARNRVPTL LWARDLAQVS AMIITRRNDR YLPQVPFPPS LEPITDLEGA LSQTKQVLVA VPSCGFRPIL ERLAGHLSSH VPLIWATKGL EPGTGRLLHE VVLELLGSGW PMAVMSGPTF AHEVVAGLPT AVTVAATESE IATCFARSLH GDTFRVYTSD DLIGVQLGGA VKNVLAIAAG ISDGLGFGAN TRAALITRGL TELVRFALAW GGQRETLMGL SGLGDLVLTC TDDQSRNRRL GLALAQGKRL DEALTLIGQA VEGAAAAKVV VARAKQLAVE MPIAEQVYQV LYAGRHPRQA VEVLCRREQK PEYA
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