Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0030 |
Symbol | |
ID | 3705963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 28738 |
End bp | 30057 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637736554 |
Product | peptidase S41A |
Protein accession | YP_342102 |
Protein GI | 77163577 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTCT CAAAACGTGA TTTACTAATA ATAACTTTGG GACTTGTTCT GGGTGTAAGC TTGGTTTTTG GGCCAATGGT CCTAGCCGAA CGCTCGGAAA ATAGACCCGA AGCTTTACCC CTGGAGGAGC TACGGGCCTT TTCAGAAGTA TTTGGGCAAA TTAAGCGTAG TTACGTTGAA ATTGTAGACG ATAAAACGCT GATTGAAGAT TCTATTCGCG GTATGCTGAC CGGCTTAGAC CCCCATTCCG CTTACCTCGA TCCTGAAGCT TACAAGGAAT TACGCATTGG AACTTCTGGT GAATTCGGAG GGCTTGGTAT CGAAGTTGGC ATGGAAGATG GCTTTGTCCG CGTGGTTGCT CCTATCGATG ATACCCCTGC CCAGAAGGCG GGCATCAACG CTGGAGATCT TATTGTCCGT ATTGATGATA CACCGGTAAA GGGTATGAGC CTTAGTGACG CGGTACAGCG AATGCGAGGT AAACCAGGCA CAGATATTCT CTTGACCATT ATCCGAGAGG GTGAAGAGCA ACCCTTAAAA TTTACCATCA CCCGCGCCAT CATCAAAGTT AAAAGCGTTA AAAATAGGAC CTTAGAAGAG GGCTATGGTT ATCTCCGTAT TAGTCAGTTC CAAACCGAAA CGGCATCTAA TCTGCAAAAA GCTATTGAAA AATTAAAAAA GGAAAACGGT GGAAAACTTA AAGGTCTAGT TCTAGACTTA CGTAACAATC CAGGAGGCGT TCTCAGTGCC GCAATAGAAG TCTCCGATGC CTTTTTGGAA AAAGGTATCA TTGTCTATAC AGAGGGCAGG GATCTGGAAT CGAAGCAGAA ATTTCGGGCT ACCTCTGGTG ATGCCCTGAA AGGGTCGCCT ATAGTAATTT TAGTAAATGG AGGCTCAGCC TCTGCTTCTG AGATTGTTTC GGGAGCTCTT CAAGATCACC ACCGAGCAAT AGTGGTAGGC TCACGTACCT TTGGTAAAGG ATCGGTGCAA ACCATTTTAC CCCTTACGGA AAATACCGCT TTGAAACTCA CTACTGCCCG CTATTACACT CCATCGGGTC GCTCTATCCA AGCCGAAGGG ATTATCCCGG ATATTGAGCT TGAAAGCGTG AAAGTTTCAG CCTCTGCTCT CTCCGATATT AACCCGGTCA GAGAAGCGAA TCTTTCCCGA CACCTTAGCA ATGGACGTAA AGCAGAAGAG AAAAAAGAAA GCACAGAAAA AGTTAAGAAA ACTTCTCTCG CCACGGAAGA CTATCCTTTG TATGAAGCCT TAAATTTACT CAAGGGATTA AGCATAGCGG CAAGCCAGCA ATACCGATAA
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Protein sequence | MPFSKRDLLI ITLGLVLGVS LVFGPMVLAE RSENRPEALP LEELRAFSEV FGQIKRSYVE IVDDKTLIED SIRGMLTGLD PHSAYLDPEA YKELRIGTSG EFGGLGIEVG MEDGFVRVVA PIDDTPAQKA GINAGDLIVR IDDTPVKGMS LSDAVQRMRG KPGTDILLTI IREGEEQPLK FTITRAIIKV KSVKNRTLEE GYGYLRISQF QTETASNLQK AIEKLKKENG GKLKGLVLDL RNNPGGVLSA AIEVSDAFLE KGIIVYTEGR DLESKQKFRA TSGDALKGSP IVILVNGGSA SASEIVSGAL QDHHRAIVVG SRTFGKGSVQ TILPLTENTA LKLTTARYYT PSGRSIQAEG IIPDIELESV KVSASALSDI NPVREANLSR HLSNGRKAEE KKESTEKVKK TSLATEDYPL YEALNLLKGL SIAASQQYR
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