Gene Noc_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0029 
Symbol 
ID3705962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp28110 
End bp28664 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content52% 
IMG OID637736553 
ProductDJ-1 
Protein accessionYP_342101 
Protein GI77163576 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTAAGG TACTTATTCC CTTGGCTCAA GGTTGTGAAG AGCTTGAAGC GGTCACACTC 
ATTGATTTGC TTAGGCGTGG GGGAATACAG GTGGTCACGG CGGGTCTTGA TGAACAGGTG
GTAACGGCTA GCCGTGGCAC CCGCTTGCTC CCTGACACCT CCTTAGATAA AGTATTTCAA
CAAGAATTTG ACATGGTAGT ATTACCAGGG GGTCAGCCGG GGGCTGATAA TCTCAATGGG
GATCGTCGCA TTCGCGCTTT ATTAAAGCGT ACTGCAGAAC GCGGAAAGAT TACGGCAGCT
ATCTGCGCTG CCCCTACCGT ACTTGCGAGT ACGGGACTGC TTGCTAGCAA ACGCGCAACG
GGTTACCCGG GTTTCCTTGA CAAACTTGAC CTGCCCACCA CCACCTTGGA AGATCAAGCA
GTCGTGGTAG ACGGTTGCGT CGTTACTTCA AAAGGGCCAG GAACGGCAAT GGATTTTGCT
CTGACTTTGA TTGAACTTCT AGTTGGCGGA GGAACCCGCA ACGAAGTTGA GGAAACTTTG
CAACGTCCGG CATAA
 
Protein sequence
MVKVLIPLAQ GCEELEAVTL IDLLRRGGIQ VVTAGLDEQV VTASRGTRLL PDTSLDKVFQ 
QEFDMVVLPG GQPGADNLNG DRRIRALLKR TAERGKITAA ICAAPTVLAS TGLLASKRAT
GYPGFLDKLD LPTTTLEDQA VVVDGCVVTS KGPGTAMDFA LTLIELLVGG GTRNEVEETL
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